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AF396866.1__AAK94354.1__X__00020
Bact-VirAF396866.1__AAK94354.1__X__00020
Identity
- Accession:
- AF396866 ↗
- Kingdom:
- phage
Quality
59.8
mean pLDDT
Taxonomy
TaxID: 49964
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-101
Domain cluster:
rep: MK448727.1__QBX16890.1__Javan291_0014__00014__D9-113
D2
high
residues 129-207
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 39.1 | 1.20e-09 | 100.0% | 87.8% |
| PF13455.13 | MUG113 | 54.8 | 1.60e-14 | 84.8% | 91.8% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 40.0 | 3.70e-01 | 98.7% | 52.0% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.58 | 35.0 | 3.71e-01 | 93.7% | 67.6% |
| 6hyfA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 3.36e-01 | 96.2% | 49.1% |
| 1mgpA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 47.0 | 3.84e-01 | 98.7% | 94.8% |
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 46.0 | 3.79e-01 | 98.7% | 94.8% |
| 1bquA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.37e-01 | 97.5% | 53.7% |
| 6l4lA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 38.0 | 3.38e-01 | 75.9% | 93.1% |
| 5adxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 42.0 | 3.38e-01 | 91.1% | 100.0% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 43.0 | 3.54e-01 | 98.7% | 95.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946107 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.84 | 79.0 | 7.34e-01 | 100.0% | 94.7% |
| 3698242 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.79 | 73.0 | 6.21e-01 | 100.0% | 73.2% |
| 3496147 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.77 | 59.0 | 5.45e-01 | 81.0% | 99.0% |
| 3998575 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 48.0 | 4.53e-01 | 82.3% | 93.7% |
| 3416455 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.52 | 37.0 | 4.07e-01 | 88.6% | 96.7% |
| 2507397 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.50 | 42.0 | 3.51e-01 | 98.7% | 95.5% |