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AF512415.1__AAM66383.1__X__00001

Bact-Vir

AF512415.1__AAM66383.1__X__00001

Identity

Accession:
AF512415 ↗
Kingdom:
phage

Quality

92.8 mean pLDDT

Taxonomy

Loebvirae› Hofneiviricota› Faserviricetes› Tubulavirales› Inoviridae› Affertcholeramvirus› Affertcholeramvirus_CTXphi

TaxID: 141904

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-195
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05946.18 best TcpA 230.7 6.40e-69 88.1% 100.0%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1oqvA00 3.30.1690.10 Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › TcpA-like pilin 0.99 97.0 8.96e-01 100.0% 83.6%
3s0tA00 3.30.1690.10 Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › TcpA-like pilin 0.83 79.0 7.22e-01 100.0% 84.4%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 34.0 3.80e-01 81.1% 59.5%
6gmhK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.65 30.0 3.39e-01 76.9% 53.9%
3fhvA00 3.30.1690.10 Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › TcpA-like pilin 0.65 54.0 5.37e-01 100.0% 84.0%
1bdfA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.63 32.0 3.76e-01 78.3% 67.9%
5xogK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.63 31.0 3.44e-01 76.9% 58.4%
6ruiK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.61 30.0 3.47e-01 81.8% 64.1%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 27.0 3.35e-01 77.6% 69.3%
1yb3A00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.55 48.0 4.59e-01 100.0% 81.8%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4617348 274.1.1.7 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › TcpA 0.99 97.0 8.81e-01 100.0% 79.9%
149275 274.1.1.7 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › TcpA 0.83 79.0 7.22e-01 100.0% 84.4%
3517458 274.1.1.10 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › PilS 0.74 51.0 5.42e-01 100.0% 80.0%
1159602 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.69 34.0 3.78e-01 81.1% 58.9%
3950275 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 33.0 4.21e-01 81.8% 77.6%
5029252 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.65 32.0 3.48e-01 81.8% 54.2%
5039467 304.165.1.0 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 0.56 34.0 3.22e-01 91.6% 48.8%
3367405 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.56 30.0 3.33e-01 96.5% 65.5%
3307398 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.55 29.0 3.29e-01 95.1% 64.5%
3321864 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 32.0 3.58e-01 95.8% 73.6%
3551826 305.1.1.2 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.54 28.0 3.14e-01 76.9% 60.9%
3329478 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.54 32.0 3.49e-01 97.9% 69.2%
6675 274.1.1.10 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › PilS 0.53 45.0 4.45e-01 100.0% 85.3%
D2 medium residues 1-52
PDB
Domain cluster: representative