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AF548457.1__AAN59927.1__X__00004

Bact-Vir

AF548457.1__AAN59927.1__X__00004

Identity

Accession:
AF548457 ↗
Kingdom:
phage

Quality

91.0 mean pLDDT

Taxonomy

Enterobacteria_phage_SC370

TaxID: 210927

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-52
PDB
Domain cluster: rep: OM158235.1__UKL14753.1__C121_20__00020__D3-61
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08410.16 best DUF1737 66.8 1.70e-18 100.0% 92.5%
D2 high residues 77-389
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03629.25 best SASA 41.0 2.50e-10 79.5% 47.8%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zmbA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.89 63.0 7.08e-01 99.7% 89.5%
2aeaA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.87 64.0 7.31e-01 100.0% 95.5%
1yzfA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.81 48.0 6.10e-01 99.7% 94.4%
1bwpA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.79 45.0 5.42e-01 100.0% 82.1%
3dciA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.77 49.0 6.06e-01 99.4% 97.1%
4s1pA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.77 45.0 5.87e-01 100.0% 98.4%
3rjtA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.76 50.0 6.05e-01 100.0% 95.8%
2q0qA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.74 49.0 5.95e-01 99.7% 97.2%
7wkqB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 39.0 4.80e-01 99.4% 92.6%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 37.0 4.78e-01 100.0% 97.3%
7y11A01 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.63 33.0 3.98e-01 96.8% 75.5%
6uqyB01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.61 52.0 5.53e-01 98.7% 100.0%
3vc7A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 41.0 4.66e-01 100.0% 88.6%
2hrzA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 38.0 4.36e-01 99.7% 83.9%
1a9yA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 38.0 4.55e-01 99.0% 94.3%
4ospD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 41.0 4.64e-01 100.0% 91.4%
2wagA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 37.0 4.38e-01 96.5% 91.2%
4e4yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 40.0 4.56e-01 100.0% 90.5%
8g7wA04 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 39.0 4.45e-01 99.0% 89.5%
1jeyA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.57 38.0 4.57e-01 99.7% 99.0%
5z2xA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 42.0 4.07e-01 99.4% 74.6%
1ga6A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.52 43.0 4.12e-01 100.0% 73.4%
3pf8A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 40.0 4.40e-01 100.0% 98.4%
3k6kA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 41.0 4.27e-01 96.8% 88.2%
2n0sA01 3.40.50.1780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 26.0 3.37e-01 94.2% 83.9%
4iqyB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.50 34.0 3.98e-01 78.9% 95.0%
2veoA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 42.0 4.11e-01 86.3% 91.6%
2d5lA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 40.0 4.33e-01 92.3% 98.8%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3986605 2007.5.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SASA 1.00 99.0 9.68e-01 100.0% 94.8%
3683753 2007.5.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SASA 0.87 65.0 7.28e-01 100.0% 94.4%
4319241 2007.5.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SASA 0.83 64.0 7.10e-01 99.7% 95.7%
3568403 2007.5.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SASA 0.70 60.0 6.30e-01 100.0% 96.1%
5073940 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.69 37.0 4.82e-01 100.0% 88.9%
4509257 2007.5.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.65 44.0 4.69e-01 100.0% 77.1%
4010951 2003.1.1.61 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR 0.60 42.0 4.44e-01 100.0% 75.5%
4015228 2003.1.1.239 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4, KR 0.59 41.0 3.24e-01 100.0% 33.9%
3688427 2003.1.1.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.58 41.0 4.54e-01 100.0% 87.1%
3960758 2003.1.1.152 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR, GDP_Man_Dehyd 0.58 40.0 4.28e-01 100.0% 80.4%
3961429 2003.1.1.61 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR 0.57 40.0 4.19e-01 100.0% 74.9%
4013467 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.57 39.0 3.99e-01 100.0% 70.0%
3695447 2003.1.1.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 44.0 4.74e-01 100.0% 91.5%
3499107 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 41.0 4.51e-01 99.7% 95.7%
3199298 2006.1.6.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N 0.53 41.0 4.45e-01 100.0% 93.8%
1298652 2003.1.1.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.53 43.0 4.43e-01 100.0% 88.1%
3288131 7579.1.1.13 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH 0.53 40.0 4.44e-01 90.7% 97.2%
4378077 2004.1.1.201 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.52 37.0 4.25e-01 99.7% 98.2%
4972142 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.52 35.0 4.07e-01 80.8% 92.9%