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AJ131519.1__CAB52505.1__X__00027

Bact-Vir

AJ131519.1__CAB52505.1__X__00027

Identity

Accession:
AJ131519 ↗
Kingdom:
phage

Quality

75.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-69
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.70 57.0 4.47e-01 92.5% 89.8%
2k7iA01 3.30.160.160 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like 0.70 54.0 5.56e-01 88.7% 95.8%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.70 60.0 4.41e-01 100.0% 79.5%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 57.0 4.16e-01 100.0% 70.3%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.64 52.0 3.79e-01 100.0% 35.1%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 49.0 3.89e-01 92.5% 40.9%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 53.0 3.37e-01 100.0% 33.9%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 50.0 2.94e-01 94.3% 24.0%
6mzoA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 50.0 3.97e-01 96.2% 78.6%
3brcA02 3.40.50.10150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit 0.62 49.0 3.90e-01 92.5% 88.3%
4a7kA03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 52.0 3.82e-01 100.0% 90.5%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 51.0 3.29e-01 100.0% 44.4%
3aqoA02 3.30.1360.200 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.61 48.0 3.71e-01 94.3% 95.7%
2r6iA01 3.30.2180.10 Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like 0.61 49.0 4.12e-01 92.5% 52.1%
1iucA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.60 50.0 3.18e-01 100.0% 82.7%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 46.0 3.73e-01 92.5% 40.9%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.60 50.0 3.16e-01 100.0% 32.6%
1c9rA04 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.59 45.0 3.81e-01 92.5% 86.0%
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.58 46.0 3.70e-01 92.5% 46.2%
3n54B01 6.20.190.10 Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 0.58 41.0 4.00e-01 77.4% 85.2%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 40.0 2.68e-01 75.5% 47.1%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.58 43.0 3.32e-01 84.9% 32.6%
3h6rA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 46.0 3.53e-01 100.0% 94.1%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 46.0 2.94e-01 98.1% 30.6%
3uw8A02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.57 45.0 3.46e-01 92.5% 38.8%
1xc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 43.0 3.63e-01 90.6% 96.1%
4mfzA02 3.40.630.120 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.56 46.0 3.33e-01 90.6% 100.0%
1g5hA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.56 42.0 2.72e-01 86.8% 28.7%
1jv2B04 4.10.1240.30 Few Secondary Structures › Irregular › Hormone receptor fold › 0.56 39.0 3.41e-01 75.5% 94.2%
3e8tA00 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.55 38.0 2.65e-01 75.5% 37.0%
4gyiA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 43.0 3.59e-01 88.7% 92.9%
4qucA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 40.0 4.01e-01 90.6% 80.4%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 43.0 3.81e-01 88.7% 92.4%
2v90C00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 42.0 3.63e-01 90.6% 65.6%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.54 42.0 3.25e-01 94.3% 34.2%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 42.0 3.78e-01 92.5% 88.0%
2d9uA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 38.0 3.60e-01 90.6% 59.5%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 41.0 4.15e-01 90.6% 88.9%
5n9bA01 2.60.40.2160 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 0.53 41.0 3.22e-01 92.5% 67.2%
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 41.0 3.80e-01 90.6% 98.6%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 41.0 3.35e-01 88.7% 52.7%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.53 34.0 3.46e-01 90.6% 66.7%
4za3A01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.53 42.0 3.08e-01 94.3% 32.5%
7vpqF01 2.60.40.3130 Mainly Beta › Sandwich › Immunoglobulin-like › Coronavirus S1 glycoprotein, central receptor binding domain (RBD) 0.53 38.0 3.14e-01 79.2% 63.0%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.53 39.0 3.59e-01 88.7% 69.1%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 40.0 3.66e-01 94.3% 85.5%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 42.0 3.97e-01 100.0% 75.4%
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.52 40.0 2.52e-01 96.2% 90.9%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.52 39.0 3.75e-01 94.3% 78.9%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 39.0 3.74e-01 90.6% 73.1%
3syjA02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.51 41.0 2.37e-01 94.3% 10.8%
2m2lA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 39.0 3.71e-01 92.5% 71.6%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 4.03e-01 98.1% 87.1%
4yfbC01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 42.0 2.73e-01 98.1% 73.2%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.84e-01 96.2% 86.1%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 40.0 3.42e-01 94.3% 51.0%
4ns4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 40.0 2.62e-01 96.2% 18.1%
8jj7A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 35.0 2.29e-01 79.2% 53.3%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4297945 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.74 56.0 5.59e-01 83.0% 80.0%
5075465 4325.1.1.0 mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.74 58.0 5.60e-01 86.8% 76.7%
4341865 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.74 57.0 5.64e-01 86.8% 81.8%
4188237 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.73 57.0 5.64e-01 86.8% 83.6%
3284714 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.73 57.0 5.41e-01 86.8% 73.0%
4243634 4325.1.1.0 mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.72 56.0 5.04e-01 88.7% 61.3%
7726 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.71 56.0 5.45e-01 90.6% 81.0%
3201717 708.1.2.6 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.63 44.0 3.14e-01 83.0% 23.6%
4510748 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.62 51.0 3.68e-01 100.0% 35.4%
4276145 220.1.1.126 beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 0.62 48.0 3.94e-01 90.6% 53.2%
3531333 220.1.1.35 beta barrels › PH domain-like › PH domain-like › PH domain-like › IQ_SEC7_PH 0.61 51.0 3.75e-01 100.0% 52.7%
3969229 5.1.4.108 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF1513 0.61 50.0 3.15e-01 100.0% 33.4%
4208333 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 48.0 3.96e-01 100.0% 59.2%
3940690 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 39.0 3.22e-01 73.6% 34.3%
3504015 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 47.0 4.23e-01 94.3% 94.1%
3233720 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 49.0 3.09e-01 94.3% 25.5%
3421658 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 49.0 4.35e-01 98.1% 77.6%
2643433 5.1.3.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.60 50.0 3.11e-01 100.0% 29.8%
3659855 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 49.0 4.42e-01 100.0% 93.8%
3924545 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.59 48.0 3.80e-01 94.3% 44.2%
4101178 212.1.1.10 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › RNase_PH 0.59 42.0 3.19e-01 81.1% 92.9%
3548416 220.1.1.158 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.59 50.0 3.94e-01 100.0% 84.2%
3215840 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.58 49.0 3.18e-01 100.0% 21.2%
5079208 7584.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.58 45.0 2.98e-01 88.7% 26.1%
3355218 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.58 39.0 3.22e-01 71.7% 99.0%
3402045 220.1.1.158 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.58 49.0 4.00e-01 100.0% 88.6%
3792778 883.1.1.2 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.58 46.0 2.75e-01 92.5% 83.4%
3925688 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.57 44.0 3.86e-01 90.6% 66.7%
3677315 2003.1.6.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.57 47.0 3.30e-01 100.0% 35.0%
3718947 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 45.0 3.29e-01 92.5% 87.3%
3552831 1.1.7.41 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.57 45.0 3.71e-01 92.5% 86.7%
3497120 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 43.0 3.72e-01 90.6% 64.2%
3906872 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.56 42.0 3.63e-01 86.8% 64.2%
3555043 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.56 43.0 3.95e-01 94.3% 62.7%
4026643 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 43.0 3.80e-01 88.7% 71.8%
3272286 220.1.1.174 beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros 0.56 46.0 3.78e-01 100.0% 75.5%
4944026 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 39.0 3.76e-01 75.5% 64.1%
5048477 109.4.1.3618 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7669 0.56 46.0 3.16e-01 100.0% 29.1%
4209885 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.56 43.0 3.26e-01 98.1% 32.0%
3931157 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 43.0 4.16e-01 92.5% 90.8%
3387410 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 42.0 3.38e-01 90.6% 40.0%
4398251 5087.3.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht 0.55 38.0 2.34e-01 73.6% 47.9%
3211234 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.55 44.0 3.35e-01 94.3% 34.5%
4869677 4967.1.1.30 alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › RVT_connect 0.55 39.0 4.01e-01 81.1% 88.0%
3720043 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.55 43.0 3.52e-01 88.7% 66.7%
5017073 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.55 45.0 3.42e-01 100.0% 36.0%
3475571 63.1.1.8 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH, PRKCSH_1 0.55 44.0 3.09e-01 100.0% 47.1%
3277727 4.8.1.43 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP 0.55 44.0 3.73e-01 94.3% 67.4%
3630677 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.54 41.0 3.36e-01 90.6% 50.0%
3491784 220.1.1.158 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.54 40.0 3.26e-01 92.5% 36.8%
3217527 883.1.1.1 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.54 37.0 2.68e-01 75.5% 38.9%
3987891 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.54 43.0 2.73e-01 94.3% 34.5%
4877157 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.54 42.0 2.72e-01 94.3% 15.8%
3288859 295.1.1.27 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 0.54 43.0 4.15e-01 96.2% 80.0%
3426675 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.53 41.0 3.99e-01 96.2% 76.3%
44680 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.53 41.0 3.60e-01 94.3% 52.6%
3168516 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.53 40.0 3.02e-01 86.8% 33.3%
5018514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 44.0 3.41e-01 100.0% 74.8%
3310899 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.53 40.0 3.60e-01 90.6% 57.6%
3684732 11.1.3.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like 0.53 41.0 3.29e-01 100.0% 99.3%
3935116 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.52 39.0 3.73e-01 90.6% 70.8%
3517706 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.52 42.0 3.05e-01 100.0% 71.6%
3890539 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.52 42.0 4.11e-01 100.0% 91.7%
3559703 101.1.8.12 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3504 0.51 40.0 2.98e-01 92.5% 37.3%
3856185 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.51 39.0 3.69e-01 90.6% 68.6%
3798312 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.51 41.0 3.91e-01 100.0% 85.7%
3564972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 41.0 3.88e-01 98.1% 75.7%
4608418 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.51 38.0 3.45e-01 90.6% 71.8%
3622024 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.51 38.0 3.73e-01 90.6% 78.3%
D2 high residues 78-142
PDB
Domain cluster: representative
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3onrJ00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.69 58.0 5.81e-01 100.0% 89.7%
1go3E02 3.30.1490.120 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain 0.69 58.0 5.54e-01 100.0% 88.9%
2joqA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 50.0 4.79e-01 98.5% 68.0%
2cc6A00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.68 56.0 5.68e-01 100.0% 95.3%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.67 54.0 4.79e-01 100.0% 60.4%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 51.0 4.79e-01 98.5% 67.1%
2rjzA02 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.66 52.0 4.55e-01 100.0% 56.6%
1qzzA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 51.0 3.71e-01 100.0% 32.0%
7dluA03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 5.07e-01 100.0% 74.7%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 48.0 4.61e-01 96.9% 68.4%
5ajiB03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 4.80e-01 100.0% 63.2%
3s1tA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 50.0 4.71e-01 98.5% 68.8%
2dt9A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 50.0 4.69e-01 98.5% 69.6%
1xdzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 48.0 3.24e-01 100.0% 22.3%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.63 55.0 4.17e-01 100.0% 64.8%
1khmA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.62 50.0 4.55e-01 100.0% 65.2%
2pmzB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.62 54.0 4.44e-01 100.0% 84.7%
3mjgX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 48.0 4.20e-01 100.0% 55.4%
3luyA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 48.0 4.40e-01 100.0% 62.9%
5xogK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.62 47.0 3.95e-01 98.5% 47.8%
3kg0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 52.0 4.57e-01 100.0% 62.9%
1ao8A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.61 46.0 3.47e-01 100.0% 32.7%
1fp5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 46.0 4.07e-01 100.0% 54.0%
3n0vA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 46.0 4.24e-01 98.5% 63.1%
4u9rA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 52.0 4.81e-01 100.0% 74.4%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 48.0 4.31e-01 100.0% 61.5%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.60 52.0 3.27e-01 100.0% 19.7%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 50.0 4.28e-01 96.9% 58.8%
1uw4A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 44.0 4.06e-01 98.5% 59.3%
1vr4E00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.59 51.0 4.62e-01 100.0% 83.9%
3g88A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 47.0 3.18e-01 100.0% 23.4%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 44.0 3.97e-01 100.0% 57.8%
5f2kB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 50.0 3.46e-01 100.0% 28.5%
1x7vA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 49.0 4.35e-01 100.0% 62.2%
2bkyX00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.59 48.0 4.37e-01 100.0% 67.4%
1ekrA00 3.30.70.640 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain 0.59 50.0 4.00e-01 100.0% 58.7%
1xppD00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.59 44.0 3.84e-01 96.9% 52.5%
4u1qA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 49.0 3.51e-01 98.5% 32.1%
2fb0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 49.0 4.37e-01 100.0% 64.9%
4zosB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 49.0 4.32e-01 100.0% 62.9%
3bm7A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 50.0 4.30e-01 100.0% 59.4%
3e8oB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 4.11e-01 95.4% 58.0%
2bbeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 49.0 4.26e-01 100.0% 60.2%
2l8yA00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.58 48.0 4.27e-01 100.0% 62.9%
4dn9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 45.0 3.95e-01 100.0% 56.7%
1q8bA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 4.16e-01 100.0% 62.4%
2w9hA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.57 43.0 3.27e-01 100.0% 33.8%
4ponA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 44.0 3.21e-01 100.0% 30.8%
2apoA03 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 47.0 4.29e-01 100.0% 67.4%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 50.0 3.90e-01 100.0% 61.9%
2raqA01 3.30.70.1340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain 0.57 51.0 4.70e-01 100.0% 98.8%
4hl9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 47.0 4.18e-01 95.4% 62.8%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.57 49.0 4.31e-01 98.5% 74.0%
2x7fC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 47.0 4.15e-01 98.5% 62.8%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.57 50.0 3.53e-01 100.0% 36.7%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 46.0 3.89e-01 100.0% 53.2%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.56 40.0 3.77e-01 95.4% 59.3%
4dpoB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 49.0 4.26e-01 100.0% 63.4%
3fz2A00 3.30.70.1700 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U 0.56 48.0 3.93e-01 100.0% 57.8%
5cvdB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 48.0 3.32e-01 96.9% 28.8%
4bsjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 49.0 4.01e-01 100.0% 61.8%
6v3pD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 3.88e-01 100.0% 57.6%
3e3pA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 46.0 4.37e-01 100.0% 76.9%
4ofyD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.52e-01 100.0% 49.5%
2gffA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 43.0 3.84e-01 98.5% 58.3%
1sqeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 47.0 4.05e-01 100.0% 61.4%
1rhfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.57e-01 100.0% 54.9%
3udcA03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 47.0 4.28e-01 100.0% 72.7%
3rgfA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 42.0 3.66e-01 98.5% 55.2%
1d06A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 44.0 3.65e-01 96.9% 80.8%
1lp9E02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 3.62e-01 95.4% 62.5%
3lvtA03 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 44.0 3.69e-01 100.0% 55.8%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 46.0 4.07e-01 96.9% 66.7%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 42.0 3.86e-01 100.0% 65.2%
4tpvA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.53 43.0 3.28e-01 98.5% 41.2%
3gz7B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 3.69e-01 100.0% 60.2%
6u6pA01 3.30.1070.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE 0.52 45.0 4.24e-01 96.9% 79.5%
6wubf01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.52 43.0 3.91e-01 100.0% 70.2%
5af7B02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.52 43.0 3.70e-01 98.5% 71.9%
1r3eA01 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.52 42.0 3.07e-01 98.5% 48.4%
3bdeB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.71e-01 100.0% 60.6%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.51 43.0 3.62e-01 100.0% 99.2%
1jmtA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 43.0 3.87e-01 100.0% 71.4%
2od6C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 43.0 3.76e-01 100.0% 63.6%
3ix9A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.51 39.0 3.02e-01 100.0% 33.7%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.51 41.0 3.37e-01 100.0% 45.3%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 41.0 3.78e-01 100.0% 66.7%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3808909 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.70 54.0 5.74e-01 100.0% 98.2%
3344504 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.70 55.0 5.54e-01 100.0% 87.5%
3973743 101.1.2.849 alpha arrays › HTH › HTH › winged helix domain › GDH_ACT2 0.70 56.0 4.94e-01 100.0% 60.0%
5079732 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.69 51.0 4.61e-01 100.0% 56.7%
4999152 872.1.1.2 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin 0.69 58.0 5.74e-01 100.0% 88.4%
4401392 872.1.1.2 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin 0.69 58.0 5.83e-01 100.0% 93.8%
4929266 872.1.1.2 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin 0.69 59.0 5.75e-01 100.0% 87.1%
4234397 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 54.0 4.69e-01 100.0% 55.0%
4887083 872.1.1.2 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin 0.69 58.0 5.52e-01 100.0% 79.2%
3551257 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.69 54.0 4.66e-01 100.0% 55.0%
5055700 872.1.1.2 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin 0.68 57.0 5.65e-01 100.0% 87.1%
3164555 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 57.0 4.36e-01 98.5% 40.0%
3969381 872.1.1.0 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.68 57.0 5.60e-01 100.0% 87.1%
4980612 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.68 52.0 4.82e-01 100.0% 66.3%
5071539 872.1.1.0 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.68 56.0 5.56e-01 100.0% 87.1%
4499366 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.67 55.0 3.49e-01 100.0% 17.5%
2771056 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.66 51.0 4.52e-01 100.0% 57.3%
3706456 304.55.2.8 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons 0.65 58.0 5.20e-01 100.0% 71.1%
4226394 513.2.1.0 a+b two layers › Obg GTP-binding protein C-terminal domain-like › Putative transferase PH0793 N-terminal domain › Putative transferase PH0793 N-terminal domain 0.65 56.0 3.58e-01 100.0% 19.7%
5068310 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.65 49.0 4.61e-01 96.9% 66.3%
4004010 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.64 57.0 5.35e-01 100.0% 81.2%
3881181 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.64 57.0 4.36e-01 98.5% 46.2%
3283466 1.1.16.1 beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD 0.64 51.0 3.95e-01 100.0% 39.3%
4059301 1.1.13.47 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.64 55.0 4.69e-01 100.0% 75.5%
5062210 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.64 48.0 4.33e-01 96.9% 58.9%
2067736 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 51.0 4.52e-01 100.0% 61.1%
3375692 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.63 54.0 3.47e-01 100.0% 20.0%
3339622 2003.1.5.342 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TYW2_N_2 0.63 55.0 3.76e-01 100.0% 27.8%
4385282 304.9.1.71 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD 0.62 55.0 4.23e-01 98.5% 49.0%
4674845 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.62 54.0 4.32e-01 100.0% 49.6%
4003081 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 55.0 5.30e-01 100.0% 86.7%
3602951 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.62 53.0 4.49e-01 100.0% 58.1%
5051350 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 49.0 4.26e-01 100.0% 56.0%
3729609 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.62 55.0 4.64e-01 100.0% 60.0%
3896678 304.47.1.1 a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA 0.62 56.0 4.52e-01 100.0% 61.7%
5029187 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.61 51.0 4.76e-01 100.0% 73.5%
5053336 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 50.0 4.30e-01 100.0% 58.0%
3403622 310.1.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain 0.60 47.0 3.95e-01 98.5% 48.7%
3298960 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.60 54.0 5.30e-01 100.0% 92.9%
3281048 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.60 53.0 4.65e-01 100.0% 65.3%
5038341 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.60 54.0 4.61e-01 100.0% 61.9%
4182510 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.60 51.0 4.67e-01 98.5% 76.7%
4037293 4956.1.1.0 a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.60 47.0 4.57e-01 96.9% 76.0%
4161001 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.60 53.0 4.65e-01 100.0% 67.4%
3340180 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.60 52.0 4.51e-01 100.0% 63.0%
3942261 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.59 51.0 4.43e-01 100.0% 62.0%
4969027 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 52.0 4.49e-01 98.5% 63.0%
3972232 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 51.0 4.41e-01 100.0% 62.0%
4094675 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.59 49.0 4.54e-01 100.0% 72.9%
3260229 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.59 50.0 4.36e-01 100.0% 62.6%
5020049 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.59 49.0 4.36e-01 98.5% 64.2%
3174446 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 52.0 3.24e-01 100.0% 32.9%
416478 872.3.1.3 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › RcsF 0.58 48.0 4.27e-01 100.0% 62.9%
3979683 886.1.1.2 a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like 0.58 52.0 3.91e-01 100.0% 41.9%
3247697 872.3.1.5 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 0.58 51.0 4.59e-01 100.0% 76.7%
4319369 304.8.1.1 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.58 44.0 4.03e-01 100.0% 61.1%
3786805 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 47.0 4.11e-01 100.0% 57.3%
4376910 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.58 49.0 4.37e-01 100.0% 65.3%
5164 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.58 47.0 4.16e-01 100.0% 62.4%
3220544 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 49.0 4.05e-01 96.9% 53.3%
3972158 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.57 48.0 4.28e-01 100.0% 64.2%
3449841 310.3.1.14 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › DUF7049 0.57 50.0 4.49e-01 100.0% 69.1%
3754223 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.57 48.0 3.32e-01 100.0% 42.7%
4964155 1.1.9.31 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA 0.57 47.0 3.80e-01 98.5% 55.7%
2642579 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.56 47.0 3.91e-01 100.0% 56.2%
3715317 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 49.0 3.05e-01 100.0% 17.0%
3382026 304.55.1.20 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N, REP_ORF2-G2P 0.56 50.0 3.82e-01 100.0% 46.3%
4221721 4956.1.1.0 a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.56 46.0 4.40e-01 96.9% 80.0%
3351368 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.56 50.0 3.60e-01 100.0% 64.3%
4021792 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.55 48.0 3.38e-01 100.0% 34.4%
3993227 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 49.0 3.09e-01 100.0% 35.2%
3301450 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 48.0 3.47e-01 100.0% 54.2%
3816949 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 48.0 3.16e-01 100.0% 41.4%
4182456 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.54 48.0 4.36e-01 96.9% 72.9%
3699188 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 45.0 2.90e-01 100.0% 19.1%
3998226 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 48.0 3.01e-01 100.0% 19.4%
1680274 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.53 47.0 4.09e-01 100.0% 65.7%
4457840 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.52 47.0 4.29e-01 100.0% 78.8%
4047137 4956.1.1.1 a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.52 41.0 3.89e-01 98.5% 75.0%
3444216 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.52 44.0 2.93e-01 98.5% 39.7%
4328537 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.52 44.0 4.06e-01 100.0% 75.3%
3218243 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.50 44.0 4.02e-01 96.9% 78.8%
5009993 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.50 43.0 3.18e-01 100.0% 35.1%
3246527 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.50 42.0 2.76e-01 100.0% 32.4%
3633052 304.61.1.1 a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Dehydratase_hem 0.50 42.0 3.39e-01 100.0% 49.3%