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AJ278322.4__CAJ29715.1__X__00033
Bact-VirAJ278322.4__CAJ29715.1__X__00033
Identity
- Accession:
- AJ278322 ↗
- Kingdom:
- phage
Quality
93.2
mean pLDDT
Taxonomy
TaxID: 28358
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-76
Domain cluster:
rep: KX557278.1__AOE44399.1__SEA_GHOBES_48__00048__D102-163
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 52.0 | 5.59e-01 | 79.1% | 87.7% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.67 | 47.0 | 4.91e-01 | 100.0% | 81.7% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.66 | 44.0 | 3.19e-01 | 71.6% | 23.4% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.63 | 52.0 | 4.08e-01 | 94.0% | 94.1% |
| 3t4rA00 | 1.20.120.1590 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.61 | 52.0 | 5.08e-01 | 100.0% | 87.5% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.61 | 39.0 | 3.38e-01 | 71.6% | 40.6% |
| 2ii2A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.61 | 40.0 | 3.55e-01 | 73.1% | 45.9% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.61 | 53.0 | 3.92e-01 | 100.0% | 36.6% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 50.0 | 4.70e-01 | 97.0% | 76.5% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.60 | 48.0 | 4.22e-01 | 100.0% | 57.7% |
| 4lzjA02 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 37.0 | 3.53e-01 | 91.0% | 50.6% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.60 | 46.0 | 4.40e-01 | 83.6% | 70.9% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 49.0 | 3.31e-01 | 91.0% | 37.9% |
| 1au7A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 50.0 | 4.90e-01 | 91.0% | 88.9% |
| 6pnjL00 | 1.20.1240.10 | Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI | 0.59 | 44.0 | 3.44e-01 | 82.1% | 37.2% |
| 4jndA02 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.58 | 50.0 | 3.39e-01 | 100.0% | 28.1% |
| 1xdiA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 47.0 | 3.34e-01 | 89.6% | 95.9% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.58 | 49.0 | 4.80e-01 | 100.0% | 86.8% |
| 3f0cA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 51.0 | 4.01e-01 | 100.0% | 94.4% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.58 | 49.0 | 3.83e-01 | 100.0% | 57.0% |
| 3lfuA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 42.0 | 4.20e-01 | 80.6% | 98.6% |
| 2j0wA02 | 1.20.120.1320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain | 0.56 | 48.0 | 4.35e-01 | 100.0% | 75.3% |
| 1puoB00 | 1.20.920.50 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.56 | 44.0 | 3.64e-01 | 94.0% | 79.6% |
| 1m9iA01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.56 | 36.0 | 3.45e-01 | 71.6% | 55.0% |
| 4xzjA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.56 | 38.0 | 2.63e-01 | 70.1% | 23.2% |
| 2ahoB02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.55 | 43.0 | 3.87e-01 | 86.6% | 61.5% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.55 | 43.0 | 3.24e-01 | 88.1% | 75.3% |
| 1oaoC01 | 1.10.8.190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 | 0.53 | 42.0 | 3.58e-01 | 89.6% | 73.3% |
| 1iv8A03 | 1.10.150.200 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 | 0.53 | 33.0 | 3.12e-01 | 77.6% | 50.6% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3954617 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.78 | 57.0 | 6.25e-01 | 98.5% | 94.5% |
| 3378219 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.74 | 66.0 | 5.46e-01 | 98.5% | 67.0% |
| 3598456 | 10.13.1.0 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A | 0.64 | 47.0 | 3.30e-01 | 79.1% | 40.2% |
| 3459209 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.63 | 47.0 | 4.97e-01 | 97.0% | 90.0% |
| 3869732 | 1008.1.1.107 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › TEX13 | 0.63 | 46.0 | 3.59e-01 | 79.1% | 54.7% |
| 4938673 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.62 | 49.0 | 5.04e-01 | 97.0% | 89.2% |
| 1596520 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.61 | 48.0 | 4.27e-01 | 98.5% | 60.2% |
| 3398473 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.60 | 53.0 | 4.54e-01 | 100.0% | 70.0% |
| 3721547 | 160.1.1.4 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_VA_C | 0.60 | 53.0 | 4.09e-01 | 100.0% | 66.0% |
| 4372286 | 7515.1.1.15 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest, Metalloenzyme | 0.60 | 52.0 | 3.28e-01 | 100.0% | 48.3% |
| 2387775 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.58 | 40.0 | 3.18e-01 | 71.6% | 35.5% |
| 3621321 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.58 | 37.0 | 3.91e-01 | 71.6% | 73.3% |
| 3883140 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.57 | 49.0 | 3.48e-01 | 98.5% | 61.8% |
| 3615391 | 3671.1.1.0 ↗ | alpha duplicates or obligate multimers › Translocated intimin receptor Tir extracellular domain › Translocated intimin receptor Tir extracellular domain › Translocated intimin receptor Tir extracellular domain | 0.57 | 45.0 | 4.45e-01 | 85.1% | 100.0% |
| 1764307 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.56 | 42.0 | 3.89e-01 | 80.6% | 64.7% |
| 5057279 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.56 | 42.0 | 2.99e-01 | 82.1% | 53.5% |
| 4590703 | 5050.1.1.54 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Mntp | 0.55 | 47.0 | 3.48e-01 | 100.0% | 47.7% |
| 3354602 | 148.1.3.32 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RuBisCO_activase_AAA_helical | 0.53 | 46.0 | 4.14e-01 | 100.0% | 82.1% |
| 3275070 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.52 | 45.0 | 4.21e-01 | 98.5% | 100.0% |