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AJ489481.1CAD33801.1X__00001

Bact-Vir

AJ489481.1__CAD33801.1__X__00001

Identity

Accession:: AJ489481 ↗
Kingdom:: phage

Quality

93.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Krischvirus› Escherichia_phage_RB49

TaxID: 50948

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-95

PDB

Domain cluster: rep: SR-VP_0-2_scaffold_141_4750547_curated_closed_complete_prodigal-single.1__X__X__00883__D106-222

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12322.15 best	T4_baseplate	76.7	3.10e-21	100.0%	42.9%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2c7yA00	3.40.47.10	Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase	0.52	40.0	2.76e-01	87.0%	94.4%
4dvyP01	1.10.357.130	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 ›	0.51	43.0	3.42e-01	94.6%	87.3%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3740693	101.1.21.1 ↗	alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N	0.57	49.0	3.01e-01	97.8%	26.5%
3574196	864.1.1.1 ↗	a+b two layers › DLC › DLC › DLC › Dynein_light	0.57	34.0	4.04e-01	70.7%	91.7%
3169674	101.1.21.1 ↗	alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N	0.56	48.0	3.59e-01	100.0%	58.1%
3419108	109.4.1.1254 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif	0.56	39.0	2.48e-01	72.8%	35.7%
3690788	101.1.21.1 ↗	alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N	0.56	47.0	3.51e-01	98.9%	64.8%
3724091	101.1.21.1 ↗	alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N	0.55	47.0	3.56e-01	98.9%	58.8%
3195871	101.1.21.0 ↗	alpha arrays › HTH › HTH › HTH in T7 RNA polymerase	0.54	44.0	2.67e-01	91.3%	20.4%
2813092	2003.1.5.66 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11	0.54	41.0	2.99e-01	82.6%	93.3%
3632684	101.1.21.0 ↗	alpha arrays › HTH › HTH › HTH in T7 RNA polymerase	0.54	45.0	2.97e-01	98.9%	35.8%
5004772	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.54	37.0	3.75e-01	81.5%	72.2%
3701494	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.52	40.0	2.96e-01	83.7%	52.7%
3672395	101.1.21.1 ↗	alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N	0.52	45.0	3.27e-01	98.9%	58.2%
3526672	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.51	40.0	2.67e-01	85.9%	57.8%
3468311	109.4.1.1254 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif	0.51	35.0	2.42e-01	70.7%	34.7%
3352831	109.4.1.1254 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif	0.51	36.0	2.42e-01	75.0%	35.7%
3734358	3924.1.1.1 ↗	alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2	0.50	39.0	2.58e-01	84.8%	42.8%
3303026	109.4.1.1254 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif	0.50	35.0	2.29e-01	73.9%	31.6%
3777032	5054.1.1.11 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › SK_channel	0.50	36.0	2.84e-01	77.2%	90.5%