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AJ512681.1__CAD54904.1__X__00002

Bact-Vir

AJ512681.1__CAD54904.1__X__00002

Identity

Accession:
AJ512681 ↗
Kingdom:
phage

Quality

84.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-59
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4d3pA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.66 45.0 3.35e-01 71.2% 76.2%
6wxrA01 1.10.640.10 Mainly Alpha › Orthogonal Bundle › Myeloperoxidase, subunit C › Haem peroxidase domain superfamily, animal type 0.58 47.0 2.83e-01 94.9% 70.4%
2rfqC03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 48.0 3.53e-01 100.0% 40.6%
2jbrA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.56 46.0 3.41e-01 100.0% 43.2%
4yk8B00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.56 43.0 3.09e-01 86.4% 59.8%
2l4eA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.55 35.0 3.61e-01 89.8% 66.7%
1x5bA01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 41.0 3.15e-01 89.8% 98.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3503345 133.1.1.1 alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.54 48.0 3.28e-01 100.0% 47.1%
4426101 589.1.2.1 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.53 40.0 3.13e-01 89.8% 70.6%
4011318 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.52 44.0 4.01e-01 100.0% 71.2%
3952144 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.51 33.0 3.27e-01 74.6% 60.0%
4943799 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 33.0 3.44e-01 74.6% 78.0%
D2 medium residues 60-339
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hlcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 25.0 4.07e-01 94.6% 100.0%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 24.0 3.59e-01 92.9% 86.8%
1uwyA02 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.57 19.0 3.03e-01 94.3% 77.3%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.56 27.0 3.79e-01 74.6% 96.0%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 21.0 3.21e-01 93.6% 88.5%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 24.0 3.54e-01 93.6% 97.5%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042735 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 56.0 5.70e-01 99.6% 76.1%
3740587 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.56 20.0 3.08e-01 94.6% 76.1%
4189243 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.55 26.0 3.73e-01 74.6% 95.4%