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CAH04240.1
Arc-VirAJ783769__CAH04240.1__X__00057
Identity
- Accession:
- AJ783769 ↗
- Protein ID:
- CAH04240.1 ↗
- Kingdom:
- archaea
Quality
92.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-114
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6qelA01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.69 | 49.0 | 3.81e-01 | 74.6% | 83.4% |
| 3ismC01 | 1.25.40.240 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain | 0.68 | 54.0 | 4.15e-01 | 85.9% | 62.3% |
| 2wj9B00 | 3.30.70.3580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein | 0.67 | 48.0 | 3.86e-01 | 76.1% | 65.5% |
| 2o1eB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.65 | 58.0 | 4.54e-01 | 100.0% | 73.5% |
| 7zmgL01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 47.0 | 4.51e-01 | 81.7% | 97.5% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 51.0 | 4.23e-01 | 93.0% | 70.7% |
| 6nplA01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.60 | 47.0 | 2.89e-01 | 85.9% | 98.1% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 3.91e-01 | 76.1% | 83.2% |
| 1tfrA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.60 | 45.0 | 3.22e-01 | 80.3% | 89.8% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 48.0 | 4.25e-01 | 91.5% | 65.0% |
| 4dmvA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 43.0 | 4.05e-01 | 80.3% | 80.0% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 36.0 | 3.41e-01 | 70.4% | 54.0% |
| 6ln3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 41.0 | 2.95e-01 | 76.1% | 58.9% |
| 4g3aB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 45.0 | 3.18e-01 | 88.7% | 68.4% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.56 | 47.0 | 3.69e-01 | 97.2% | 95.1% |
| 6j09A04 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 39.0 | 3.81e-01 | 73.2% | 71.4% |
| 3cjdA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 42.0 | 3.07e-01 | 81.7% | 51.1% |
| 1ptmA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.53 | 42.0 | 2.70e-01 | 85.9% | 76.2% |
| 3psfA03 | 1.10.3500.10 | Mainly Alpha › Orthogonal Bundle › Tex N-terminal region-like › Tex N-terminal region-like | 0.52 | 47.0 | 3.01e-01 | 97.2% | 61.5% |
| 8hbfB01 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.51 | 42.0 | 3.19e-01 | 91.5% | 86.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3423798 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.70 | 60.0 | 4.49e-01 | 97.2% | 67.0% |
| 5010578 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.65 | 48.0 | 4.49e-01 | 80.3% | 67.8% |
| 3736801 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.62 | 53.0 | 4.08e-01 | 97.2% | 67.3% |
| 3386773 | 3666.1.1.1 ↗ | extended segments › 30S ribosomal protein S21 › 30S ribosomal protein S21 › 30S ribosomal protein S21 › Ribosomal_S21 | 0.60 | 47.0 | 4.81e-01 | 83.1% | 97.1% |
| 4203057 | 101.1.2.561 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28826 | 0.59 | 48.0 | 3.83e-01 | 90.1% | 56.7% |
| 4963693 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.59 | 51.0 | 3.44e-01 | 93.0% | 62.4% |
| 3500478 | 109.4.1.140 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20 | 0.59 | 51.0 | 3.44e-01 | 95.8% | 64.0% |
| 4939027 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 44.0 | 3.83e-01 | 84.5% | 71.7% |
| 3516300 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 49.0 | 3.35e-01 | 100.0% | 65.6% |
| 3934904 | 109.4.1.106 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CPL | 0.55 | 49.0 | 2.89e-01 | 100.0% | 27.0% |
| 4015213 | 3444.1.1.0 ↗ | alpha arrays › DP domain › DP domain › DP domain | 0.54 | 45.0 | 3.95e-01 | 97.2% | 61.9% |
| 3546999 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.53 | 46.0 | 3.95e-01 | 91.5% | 74.3% |
| 3421598 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.52 | 41.0 | 3.36e-01 | 84.5% | 62.4% |
| 4177873 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 3.36e-01 | 90.1% | 68.9% |