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AJ842011.2__CAH56656.1__PHG11b_29__00029
Bact-VirAJ842011.2__CAH56656.1__PHG11b_29__00029
Identity
- Accession:
- AJ842011 ↗
- Kingdom:
- phage
Quality
79.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-105
Domain cluster:
rep: NC_041949.1__YP_009603211.1__FDH66_gp75__00023__D24-141
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05521.19 best | Phage_HCP | 38.2 | 2.50e-09 | 100.0% | 89.6% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.83 | 51.0 | 6.31e-01 | 99.0% | 96.8% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.78 | 72.0 | 7.23e-01 | 98.0% | 100.0% |
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.77 | 72.0 | 6.87e-01 | 100.0% | 89.3% |
| 3qzqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 46.0 | 5.31e-01 | 100.0% | 92.8% |
| 1shyA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 54.0 | 5.40e-01 | 100.0% | 77.5% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 48.0 | 4.94e-01 | 100.0% | 75.0% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 52.0 | 5.19e-01 | 100.0% | 79.2% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.66 | 51.0 | 4.84e-01 | 100.0% | 68.4% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.66 | 58.0 | 5.67e-01 | 100.0% | 89.0% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.65 | 48.0 | 4.68e-01 | 100.0% | 70.6% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.64 | 58.0 | 5.04e-01 | 100.0% | 85.2% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 41.0 | 4.46e-01 | 76.5% | 78.3% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.63 | 57.0 | 4.98e-01 | 100.0% | 83.7% |
| 2iabA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 54.0 | 4.75e-01 | 100.0% | 73.4% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.59 | 46.0 | 4.01e-01 | 100.0% | 55.0% |
| 3ub0A02 | 3.30.70.3540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nsp8 replicase, head domain | 0.57 | 46.0 | 4.76e-01 | 100.0% | 91.3% |
| 2ahmH02 | 3.30.70.3540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nsp8 replicase, head domain | 0.54 | 44.0 | 4.56e-01 | 100.0% | 90.3% |
| 5zl6A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.52 | 44.0 | 3.87e-01 | 100.0% | 61.6% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 3.93e-01 | 92.9% | 78.0% |
| 3co8A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.51 | 43.0 | 3.77e-01 | 99.0% | 62.2% |
| 7z6eA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 3.30e-01 | 99.0% | 58.2% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3058418 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.79 | 63.0 | 6.25e-01 | 100.0% | 80.4% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.79 | 74.0 | 7.10e-01 | 100.0% | 90.9% |
| 4034130 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 70.0 | 6.94e-01 | 100.0% | 93.0% |
| 119252 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.77 | 72.0 | 6.87e-01 | 100.0% | 89.3% |
| 5003311 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 72.0 | 6.88e-01 | 100.0% | 96.4% |
| 4472606 | 1.1.13.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 | 0.77 | 58.0 | 5.76e-01 | 100.0% | 77.0% |
| 3956293 | 1.1.5.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF4873 | 0.76 | 57.0 | 5.71e-01 | 100.0% | 77.0% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.75 | 69.0 | 6.76e-01 | 100.0% | 93.3% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.75 | 64.0 | 6.68e-01 | 100.0% | 97.8% |
| 4669352 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 64.0 | 6.20e-01 | 100.0% | 83.6% |
| 4954563 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 59.0 | 6.35e-01 | 99.0% | 97.6% |
| 4032900 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 67.0 | 6.59e-01 | 100.0% | 97.1% |
| 5082328 | 1.1.13.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join_3 | 0.73 | 66.0 | 6.73e-01 | 99.0% | 98.9% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.72 | 59.0 | 6.28e-01 | 98.0% | 100.0% |
| 4879695 | 1.1.13.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 | 0.71 | 65.0 | 5.87e-01 | 100.0% | 75.8% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.70 | 59.0 | 6.08e-01 | 100.0% | 94.6% |
| 3587815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 63.0 | 6.20e-01 | 100.0% | 93.3% |
| 4259247 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.67 | 50.0 | 5.01e-01 | 99.0% | 78.8% |
| 119197 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.66 | 58.0 | 5.67e-01 | 100.0% | 89.0% |
| 3966479 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.65 | 58.0 | 4.89e-01 | 100.0% | 87.3% |
| 4878666 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.65 | 59.0 | 5.26e-01 | 100.0% | 83.3% |
| 4260208 | 1.1.13.62 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 | 0.63 | 57.0 | 5.58e-01 | 96.9% | 99.0% |
| 3513184 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 50.0 | 3.83e-01 | 100.0% | 37.3% |
| 4553723 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 42.0 | 4.32e-01 | 96.9% | 71.6% |
| 3592726 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 42.0 | 4.02e-01 | 84.7% | 65.2% |
| 5063379 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.57 | 50.0 | 4.09e-01 | 96.9% | 92.8% |
| 3579511 | 11.1.1.842 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C | 0.53 | 37.0 | 3.05e-01 | 72.4% | 47.4% |
| 3416144 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.52 | 45.0 | 3.57e-01 | 98.0% | 86.7% |
| 3518876 | 12.1.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C | 0.50 | 46.0 | 4.50e-01 | 100.0% | 95.2% |
| 3929121 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 32.0 | 3.04e-01 | 76.5% | 53.9% |