←Back to structures
AJ842011.2__CAH56665.1__PHG11b_38__00038
Bact-VirAJ842011.2__CAH56665.1__PHG11b_38__00038
Identity
- Accession:
- AJ842011 ↗
- Kingdom:
- phage
Quality
81.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-97
Domain cluster:
rep: MT806187.1__QNO13210.1__BacuniF2_00039__00002__D5-90
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 32.0 | 3.46e-01 | 90.3% | 63.2% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.58 | 46.0 | 4.19e-01 | 87.1% | 78.9% |
| 2o4cA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 41.0 | 3.72e-01 | 75.3% | 98.4% |
| 2g47A04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.56 | 44.0 | 3.22e-01 | 82.8% | 78.8% |
| 2veoA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 2.99e-01 | 83.9% | 69.8% |
| 1iv8A04 | 1.10.10.470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4 | 0.55 | 41.0 | 4.09e-01 | 100.0% | 76.3% |
| 1o3uA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 43.0 | 3.98e-01 | 84.9% | 95.0% |
| 2xvtC00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.52 | 37.0 | 3.98e-01 | 96.8% | 87.3% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.52 | 37.0 | 2.93e-01 | 79.6% | 35.8% |
| 2yx8A00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.51 | 38.0 | 4.00e-01 | 97.8% | 90.1% |
| 3qybA02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.51 | 40.0 | 4.04e-01 | 90.3% | 84.9% |
| 2wb0X01 | 1.10.269.10 | Mainly Alpha › Orthogonal Bundle › Adenovirus Single-stranded Dna-binding Protein, domain 1 › Adenovirus DNA-binding, N-terminal domain | 0.50 | 40.0 | 3.72e-01 | 87.1% | 80.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051710 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.58 | 46.0 | 3.85e-01 | 87.1% | 93.3% |
| 3608709 | 101.1.10.15 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB_C_1 | 0.56 | 42.0 | 3.86e-01 | 78.5% | 89.2% |
| 5055415 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.56 | 41.0 | 2.64e-01 | 98.9% | 15.3% |
| 4927466 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.55 | 37.0 | 3.80e-01 | 75.3% | 72.2% |
| 3377792 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 37.0 | 3.98e-01 | 80.6% | 83.7% |
| 4063201 | 102.1.1.100 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF29713 | 0.53 | 33.0 | 3.64e-01 | 100.0% | 82.6% |
| 4040561 | 176.1.1.0 ↗ | alpha arrays › Annexin › Annexin › Annexin | 0.52 | 30.0 | 3.26e-01 | 95.7% | 68.0% |
| 4460903 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.52 | 35.0 | 3.62e-01 | 97.8% | 72.2% |
| 3839950 | 601.7.1.57 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN_Apea | 0.51 | 40.0 | 3.69e-01 | 86.0% | 100.0% |
| 3588856 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.51 | 37.0 | 3.63e-01 | 78.5% | 93.3% |
| 4934256 | 2007.1.11.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains | 0.50 | 39.0 | 3.37e-01 | 89.2% | 52.0% |