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CAH69389.1

Arc-Vir

AJ854042__CAH69389.1__X__00002

Identity

Accession:
AJ854042 ↗
Protein ID:
CAH69389.1 ↗
Kingdom:
archaea

Quality

79.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-180
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nkbB02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.62 23.0 3.26e-01 71.3% 66.7%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.59 31.0 3.42e-01 83.9% 60.3%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.55 27.0 2.81e-01 71.3% 49.1%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.52 29.0 3.54e-01 74.1% 82.2%
4on1A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.51 39.0 4.31e-01 97.7% 99.3%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.51 38.0 3.34e-01 75.9% 95.7%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.51 27.0 3.30e-01 79.3% 76.8%
2htaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 40.0 3.40e-01 83.3% 98.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3697524 9.2.1.7 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › PF30970 0.58 29.0 4.06e-01 85.6% 94.4%
4940664 9.16.1.0 beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 0.56 24.0 3.45e-01 87.9% 83.5%
4940665 9.16.1.0 beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 0.54 24.0 3.39e-01 76.4% 85.4%
2393149 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.53 34.0 4.04e-01 75.3% 93.3%
4950140 9.1.1.4 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.52 31.0 3.84e-01 71.8% 91.3%
1309460 3338.1.1.1 a+b two layers › Fragilysin-3 prodomain-like › Fragilysin-3 prodomain › Fragilysin-3 prodomain › fragilysinNterm 0.52 39.0 4.26e-01 97.1% 95.8%
D2 high residues 185-334
PDB