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CAH69408.1

Arc-Vir

AJ854042__CAH69408.1__X__00021

Identity

Accession:
AJ854042 ↗
Protein ID:
CAH69408.1 ↗
Kingdom:
archaea

Quality

79.2 mean pLDDT

Taxonomy

Zilligvirae› Taleaviricota› Tokiviricetes› Ligamenvirales› Lipothrixviridae› Deltalipothrixvirus› Deltalipothrixvirus_pozzuoliense

TaxID: 300186

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 48-72_129-201
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hw4A01 3.50.20.20 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus 0.56 38.0 3.67e-01 74.5% 60.9%
4do8A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.55 35.0 4.10e-01 98.0% 97.0%
3hh7A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.55 34.0 3.94e-01 89.8% 92.3%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 30.0 3.30e-01 99.0% 67.5%
2l03A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.53 38.0 4.13e-01 95.9% 100.0%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 33.0 3.29e-01 100.0% 61.4%
1va9A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.32e-01 71.4% 74.6%
2n99A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.51 36.0 3.87e-01 96.9% 96.1%
1blwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 35.0 3.46e-01 71.4% 90.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3540023 382.1.1.1 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.56 44.0 4.60e-01 98.0% 93.3%
3857592 382.1.1.1 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.56 43.0 4.53e-01 98.0% 92.2%
5053865 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.55 35.0 3.67e-01 99.0% 70.0%
1713072 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 32.0 3.30e-01 96.9% 58.8%
3764749 382.1.1.2 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP 0.53 35.0 4.00e-01 94.9% 94.3%
4075642 382.1.1.7 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_cobra-type 0.53 34.0 3.88e-01 98.0% 96.9%
3531341 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 38.0 4.07e-01 92.9% 95.0%
3733897 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.50 42.0 4.13e-01 91.8% 94.4%
D2 medium residues 73-128_202-217
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 45.0 3.90e-01 70.8% 37.6%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 35.0 3.46e-01 95.8% 68.0%
1g6zA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 29.0 2.99e-01 91.7% 55.7%
4dq5B00 1.10.530.50 Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 0.51 42.0 3.39e-01 98.6% 55.6%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 42.0 3.71e-01 97.2% 64.7%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4340041 1074.1.1.3 ↗ alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › RNR_Alpha 0.60 53.0 4.60e-01 100.0% 80.9%
4928786 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.57 42.0 2.99e-01 77.8% 52.6%
4141047 593.1.1.0 ↗ alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like 0.54 39.0 2.70e-01 77.8% 30.4%
3721358 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.53 37.0 3.08e-01 100.0% 41.6%
3880429 2006.1.6.39 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Mat89Bb 0.51 43.0 2.98e-01 94.4% 90.2%
3580401 178.1.1.0 ↗ alpha arrays › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB/MDM2 domain 0.51 39.0 3.72e-01 83.3% 92.9%