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AJ972879.2__CCE26247.1__X__00225

Bact-Vir

AJ972879.2__CCE26247.1__X__00225

Identity

Accession:
AJ972879 ↗
Kingdom:
phage

Quality

72.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yersinia_phage_phiR1-37

TaxID: 331278

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-149
PDB
Domain cluster: rep: gwf2_scaffold_96_prodigal-single.1__X__X__00195__D12-133
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26820.1 best Phage_T4_Y00F 77.2 2.30e-21 86.5% 97.2%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kf6A04 4.10.80.40 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain 0.66 15.0 3.14e-01 83.8% 77.1%
2yq2A02 2.60.40.3000 Mainly Beta › Sandwich › Immunoglobulin-like › Pestivirus envelope glycoprotein E2, domain B 0.61 25.0 3.31e-01 86.5% 68.4%
3gqhA02 4.10.80.40 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain 0.52 16.0 2.84e-01 73.0% 95.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3759402 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 19.0 2.92e-01 84.5% 56.9%
3960877 295.1.1.27 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 0.56 26.0 3.57e-01 80.4% 88.6%
4963445 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.50 26.0 3.29e-01 92.6% 84.7%