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AJ972879.2__CCE26292.1__X__00270
Bact-VirAJ972879.2__CCE26292.1__X__00270
Identity
- Accession:
- AJ972879 ↗
- Kingdom:
- phage
Quality
94.7
mean pLDDT
Cluster
View cluster (52 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-109
Domain cluster:
rep: ON526969.1__USH44526.1__SEA_CASSITA_72__00071__D13-114
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00436.32 best | SSB | 42.3 | 8.60e-11 | 96.8% | 84.6% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.93 | 81.0 | 7.65e-01 | 100.0% | 77.5% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.89 | 66.0 | 6.62e-01 | 100.0% | 75.3% |
| 1ue6D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.88 | 73.0 | 7.05e-01 | 100.0% | 78.8% |
| 2cwaA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.88 | 69.0 | 6.53e-01 | 100.0% | 70.6% |
| 2vw9B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.88 | 82.0 | 7.87e-01 | 100.0% | 88.6% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.87 | 75.0 | 7.30e-01 | 100.0% | 83.3% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.87 | 67.0 | 6.88e-01 | 100.0% | 84.4% |
| 3ulpD00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 79.0 | 7.37e-01 | 100.0% | 85.0% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.82 | 67.0 | 6.59e-01 | 100.0% | 81.0% |
| 2hqlA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 63.0 | 6.42e-01 | 98.9% | 87.9% |
| 3en2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 63.0 | 6.42e-01 | 100.0% | 87.9% |
| 3o2zF00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 54.0 | 5.96e-01 | 100.0% | 88.3% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 65.0 | 6.40e-01 | 100.0% | 84.8% |
| 2xvsA00 | 2.40.50.550 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.77 | 60.0 | 4.93e-01 | 100.0% | 47.0% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 63.0 | 6.16e-01 | 100.0% | 82.5% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 53.0 | 5.05e-01 | 100.0% | 63.3% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 65.0 | 6.14e-01 | 100.0% | 80.0% |
| 3j7aV00 | 2.40.50.1000 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 55.0 | 4.70e-01 | 92.6% | 89.0% |
| 1xjvA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 56.0 | 4.81e-01 | 100.0% | 73.8% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 35.0 | 3.16e-01 | 100.0% | 44.3% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 34.0 | 2.89e-01 | 88.4% | 35.9% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 44.0 | 3.64e-01 | 92.6% | 69.9% |
| 4oo1I01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 32.0 | 3.51e-01 | 75.8% | 77.3% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.51 | 39.0 | 3.24e-01 | 100.0% | 46.9% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.51 | 32.0 | 2.96e-01 | 98.9% | 48.0% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 31.0 | 2.81e-01 | 89.5% | 42.9% |
| 2g16B00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.50 | 38.0 | 3.16e-01 | 100.0% | 46.6% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4044404 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.92 | 87.0 | 8.38e-01 | 100.0% | 89.5% |
| 3839607 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.90 | 83.0 | 7.65e-01 | 100.0% | 78.8% |
| 4680392 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.89 | 79.0 | 7.42e-01 | 100.0% | 80.0% |
| 4232994 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.88 | 77.0 | 7.30e-01 | 100.0% | 80.0% |
| 4025160 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.87 | 82.0 | 7.34e-01 | 100.0% | 80.8% |
| 294 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.87 | 81.0 | 6.92e-01 | 100.0% | 66.2% |
| 3375524 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.87 | 74.0 | 6.74e-01 | 100.0% | 70.8% |
| 4032979 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.87 | 77.0 | 7.27e-01 | 100.0% | 80.9% |
| 4277262 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.87 | 78.0 | 7.20e-01 | 100.0% | 77.1% |
| 4170378 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.86 | 79.0 | 7.31e-01 | 100.0% | 80.0% |
| 2845667 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.86 | 72.0 | 6.79e-01 | 100.0% | 76.1% |
| 3616890 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.85 | 77.0 | 7.19e-01 | 100.0% | 79.1% |
| 3924081 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.85 | 79.0 | 6.81e-01 | 100.0% | 67.1% |
| 2035523 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.84 | 77.0 | 7.22e-01 | 100.0% | 82.1% |
| 4137219 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.84 | 73.0 | 7.16e-01 | 100.0% | 87.0% |
| 4296288 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.83 | 75.0 | 7.29e-01 | 100.0% | 86.7% |
| 3814285 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.83 | 73.0 | 6.95e-01 | 100.0% | 80.9% |
| 3473720 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.83 | 72.0 | 6.88e-01 | 100.0% | 80.9% |
| 3215667 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.83 | 79.0 | 7.18e-01 | 100.0% | 79.2% |
| 3707760 | 2.1.1.225 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 | 0.82 | 78.0 | 7.09e-01 | 100.0% | 82.5% |
| 4478491 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.82 | 74.0 | 7.16e-01 | 100.0% | 87.6% |
| 3608487 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 70.0 | 6.75e-01 | 100.0% | 82.9% |
| 5050547 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.81 | 57.0 | 5.31e-01 | 100.0% | 60.0% |
| 4047115 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.81 | 70.0 | 6.92e-01 | 100.0% | 88.0% |
| 3448049 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.81 | 70.0 | 6.73e-01 | 100.0% | 81.9% |
| 4122961 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.80 | 69.0 | 6.85e-01 | 100.0% | 88.0% |
| 3716709 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 74.0 | 6.69e-01 | 100.0% | 76.4% |
| 3995685 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.80 | 73.0 | 6.92e-01 | 100.0% | 84.4% |
| 3600626 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 69.0 | 6.76e-01 | 100.0% | 87.0% |
| 4068016 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.79 | 69.0 | 6.69e-01 | 100.0% | 83.8% |
| 164228 | 2.1.1.54 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3217 | 0.77 | 63.0 | 6.13e-01 | 100.0% | 78.8% |
| 4264144 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.77 | 66.0 | 6.35e-01 | 100.0% | 81.9% |
| 3599731 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 71.0 | 5.62e-01 | 100.0% | 57.6% |
| 4238279 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.76 | 69.0 | 6.48e-01 | 100.0% | 80.9% |
| 3365669 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.76 | 67.0 | 6.31e-01 | 100.0% | 80.0% |
| 222748 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.76 | 61.0 | 6.25e-01 | 96.8% | 88.9% |
| 4626934 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 68.0 | 6.57e-01 | 100.0% | 85.7% |
| 381191 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.76 | 63.0 | 6.16e-01 | 100.0% | 82.5% |
| 4327241 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.75 | 64.0 | 6.33e-01 | 100.0% | 87.8% |
| 4084495 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.75 | 66.0 | 6.35e-01 | 100.0% | 83.8% |
| 317 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.74 | 65.0 | 6.14e-01 | 100.0% | 80.0% |
| 3467519 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.71 | 61.0 | 5.86e-01 | 89.5% | 81.9% |
| 3931232 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 46.0 | 4.24e-01 | 100.0% | 63.2% |
| None | — | 0.57 | 38.0 | 2.73e-01 | 94.7% | 23.7% | |
| 4955607 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.53 | 39.0 | 3.04e-01 | 100.0% | 34.9% |
| 4377480 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.52 | 43.0 | 3.30e-01 | 94.7% | 57.6% |
| 4983910 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 35.0 | 3.14e-01 | 98.9% | 50.0% |
| 3761138 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 32.0 | 3.01e-01 | 100.0% | 51.3% |