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AJ972879.2__CCE26314.1__X__00292

Bact-Vir

AJ972879.2__CCE26314.1__X__00292

Identity

Accession:
AJ972879 ↗
Kingdom:
phage

Quality

76.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-89
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hm7B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.63 53.0 3.58e-01 90.7% 42.3%
4h9nC00 1.20.58.2170 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 47.0 3.54e-01 81.4% 36.1%
3ajmB02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.57 43.0 3.76e-01 81.4% 69.2%
3jsbA01 1.20.1440.300 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain 0.56 37.0 3.80e-01 73.3% 71.6%
3kzqA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 38.0 2.91e-01 70.9% 82.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3718964 7039.1.1.0 a+b complex topology › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM 0.75 56.0 3.96e-01 77.9% 42.4%
3275225 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 45.0 4.83e-01 74.4% 77.3%
3420021 101.1.1.121 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.67 48.0 4.19e-01 74.4% 50.4%
5053286 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.61 51.0 3.44e-01 90.7% 69.8%
3260123 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.51 44.0 3.40e-01 94.2% 64.2%