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AJ972879.2__CCE26352.1__X__00330
Bact-VirAJ972879.2__CCE26352.1__X__00330
Identity
- Accession:
- AJ972879 ↗
- Kingdom:
- phage
Quality
86.6
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 156-253
Domain cluster:
representative
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bq9A02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.90 | 70.0 | 7.16e-01 | 100.0% | 84.0% |
| 3lpxB02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.89 | 70.0 | 7.16e-01 | 100.0% | 84.0% |
| 3k59A02 | 3.30.70.2250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif | 0.67 | 42.0 | 4.91e-01 | 88.8% | 92.5% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 41.0 | 4.54e-01 | 87.8% | 81.1% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 44.0 | 4.72e-01 | 88.8% | 81.5% |
| 2od4B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 48.0 | 5.06e-01 | 89.8% | 84.3% |
| 3wx4A00 | 3.30.70.2770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 49.0 | 4.92e-01 | 89.8% | 78.6% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 43.0 | 4.74e-01 | 88.8% | 84.8% |
| 4nohA01 | 3.30.70.3060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 40.0 | 4.56e-01 | 94.9% | 85.9% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.64 | 46.0 | 4.64e-01 | 92.9% | 75.0% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 45.0 | 4.81e-01 | 88.8% | 82.8% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 45.0 | 4.80e-01 | 87.8% | 83.5% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 44.0 | 4.49e-01 | 88.8% | 75.5% |
| 2ofhX00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 41.0 | 4.60e-01 | 89.8% | 93.0% |
| 1pqxA00 | 3.30.1370.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Scaffold protein Nfu/NifU, N-terminal domain | 0.62 | 48.0 | 5.03e-01 | 100.0% | 89.0% |
| 1d1rA00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.62 | 43.0 | 4.56e-01 | 100.0% | 84.3% |
| 1lk5A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 43.0 | 4.74e-01 | 93.9% | 91.1% |
| 2qmwA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 42.0 | 4.60e-01 | 88.8% | 89.6% |
| 1nh8A03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 37.0 | 4.24e-01 | 88.8% | 86.6% |
| 3v2uC02 | 3.30.70.3170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 45.0 | 4.58e-01 | 89.8% | 78.9% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 39.0 | 4.25e-01 | 89.8% | 85.5% |
| 3en9A03 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 42.0 | 4.79e-01 | 90.8% | 100.0% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 43.0 | 4.38e-01 | 88.8% | 77.6% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 46.0 | 4.62e-01 | 89.8% | 83.7% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 47.0 | 4.62e-01 | 88.8% | 79.4% |
| 7qh2C03 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 44.0 | 4.76e-01 | 90.8% | 98.7% |
| 2dkhA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.59 | 38.0 | 3.69e-01 | 88.8% | 57.0% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 43.0 | 4.69e-01 | 91.8% | 93.9% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 4.29e-01 | 88.8% | 77.3% |
| 4zosB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 4.31e-01 | 88.8% | 78.4% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 43.0 | 4.32e-01 | 89.8% | 76.2% |
| 2ahoB03 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.58 | 41.0 | 4.31e-01 | 88.8% | 84.1% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 4.30e-01 | 88.8% | 79.2% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 40.0 | 4.45e-01 | 90.8% | 96.0% |
| 2d8iA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.57 | 36.0 | 3.80e-01 | 99.0% | 70.5% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 4.19e-01 | 88.8% | 76.0% |
| 3oksA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 43.0 | 3.63e-01 | 100.0% | 45.5% |
| 2bbeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 4.19e-01 | 88.8% | 75.7% |
| 3kmuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 38.0 | 4.03e-01 | 87.8% | 78.2% |
| 3n5mB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 45.0 | 3.76e-01 | 100.0% | 48.3% |
| 1zodA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 44.0 | 4.01e-01 | 100.0% | 60.3% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.57 | 38.0 | 3.52e-01 | 75.5% | 53.6% |
| 1golA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 39.0 | 3.65e-01 | 87.8% | 56.2% |
| 3d3yA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.56 | 49.0 | 4.00e-01 | 98.0% | 52.1% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 41.0 | 4.40e-01 | 95.9% | 93.8% |
| 5vyeA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 36.0 | 3.65e-01 | 100.0% | 64.7% |
| 2op5B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 43.0 | 4.34e-01 | 88.8% | 85.0% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.54 | 44.0 | 3.49e-01 | 90.8% | 43.7% |
| 3b8xA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 49.0 | 4.54e-01 | 100.0% | 81.5% |
| 3dxvA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 42.0 | 3.69e-01 | 100.0% | 55.3% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.54 | 42.0 | 3.99e-01 | 89.8% | 69.4% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 41.0 | 3.94e-01 | 100.0% | 73.1% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 40.0 | 3.67e-01 | 85.7% | 63.6% |
| 4h4kA01 | 3.30.70.2940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 3.77e-01 | 88.8% | 82.0% |
| 1vrmA01 | 3.10.520.10 | Alpha Beta › Roll › T-fold › ApbE-like domains | 0.51 | 29.0 | 2.33e-01 | 93.9% | 25.0% |
| 4nhxA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 39.0 | 3.06e-01 | 83.7% | 83.3% |
| 1s28A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 41.0 | 3.82e-01 | 96.9% | 69.2% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4624017 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.93 | 72.0 | 5.67e-01 | 100.0% | 43.3% |
| 396210 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.92 | 75.0 | 5.39e-01 | 100.0% | 34.6% |
| 3962339 | 4014.1.1.0 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase | 0.90 | 74.0 | 5.76e-01 | 100.0% | 44.9% |
| 2140592 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.90 | 70.0 | 5.50e-01 | 100.0% | 43.4% |
| 3590557 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.88 | 71.0 | 5.46e-01 | 100.0% | 42.1% |
| 4855517 | 101.1.2.9 ↗ | alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV | 0.86 | 70.0 | 5.17e-01 | 100.0% | 36.7% |
| 3965475 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.79 | 74.0 | 5.66e-01 | 100.0% | 49.8% |
| 4936431 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.75 | 49.0 | 5.45e-01 | 90.8% | 86.7% |
| 3958367 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.74 | 38.0 | 4.77e-01 | 74.5% | 85.5% |
| 3713128 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.74 | 48.0 | 5.53e-01 | 87.8% | 91.4% |
| 4024263 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.73 | 69.0 | 5.17e-01 | 100.0% | 51.2% |
| 4937285 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.71 | 51.0 | 5.18e-01 | 92.9% | 75.8% |
| 3614277 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.71 | 53.0 | 4.27e-01 | 100.0% | 42.2% |
| 4313857 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.69 | 44.0 | 4.99e-01 | 88.8% | 88.6% |
| 5066425 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.68 | 43.0 | 4.64e-01 | 88.8% | 76.2% |
| 3511024 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.68 | 51.0 | 5.09e-01 | 89.8% | 76.0% |
| 3996296 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.68 | 43.0 | 4.14e-01 | 90.8% | 54.8% |
| 4540833 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.67 | 49.0 | 5.21e-01 | 88.8% | 88.2% |
| 5037964 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.66 | 52.0 | 5.03e-01 | 93.9% | 74.5% |
| 4441813 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.65 | 47.0 | 4.97e-01 | 88.8% | 85.9% |
| 3988189 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 45.0 | 4.87e-01 | 90.8% | 87.5% |
| 4993405 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.65 | 42.0 | 4.65e-01 | 87.8% | 85.3% |
| 3386924 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 47.0 | 4.68e-01 | 100.0% | 72.4% |
| 5189 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 47.0 | 4.69e-01 | 89.8% | 76.0% |
| 4450606 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.63 | 47.0 | 5.01e-01 | 92.9% | 89.4% |
| 3329735 | 327.11.2.37 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st | 0.62 | 41.0 | 4.64e-01 | 88.8% | 95.7% |
| 3664564 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.61 | 37.0 | 4.52e-01 | 82.7% | 100.0% |
| 4958236 | 309.1.1.14 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › MZB | 0.61 | 55.0 | 4.56e-01 | 100.0% | 88.8% |
| 3280383 | 327.16.1.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › YflT | 0.61 | 41.0 | 4.67e-01 | 87.8% | 100.0% |
| 5049819 | 309.1.1.14 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › MZB | 0.60 | 54.0 | 4.46e-01 | 100.0% | 87.4% |
| 5048300 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 40.0 | 3.96e-01 | 89.8% | 63.8% |
| 3970630 | 304.4.1.57 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MFS_3 | 0.59 | 45.0 | 4.34e-01 | 89.8% | 71.8% |
| 3847949 | 327.11.2.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › MOEP19 | 0.58 | 40.0 | 4.01e-01 | 89.8% | 67.6% |
| 3967172 | 309.1.1.11 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › PqqF-like_C_4 | 0.58 | 51.0 | 4.16e-01 | 99.0% | 51.4% |
| 4029490 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 53.0 | 4.01e-01 | 100.0% | 69.3% |
| 4169399 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.58 | 42.0 | 4.56e-01 | 88.8% | 94.9% |
| 3612606 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.58 | 50.0 | 4.84e-01 | 93.9% | 93.6% |
| 4355203 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.58 | 52.0 | 4.03e-01 | 100.0% | 59.5% |
| None | — | 0.57 | 52.0 | 2.94e-01 | 100.0% | 14.9% | |
| 4395587 | 206.1.1.98 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1, APH | 0.57 | 52.0 | 4.06e-01 | 100.0% | 62.4% |
| 4928432 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.57 | 42.0 | 4.25e-01 | 88.8% | 80.0% |
| 5082696 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.57 | 52.0 | 4.06e-01 | 100.0% | 67.0% |
| 5022581 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.57 | 52.0 | 4.07e-01 | 100.0% | 64.5% |
| 4234613 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.57 | 51.0 | 4.04e-01 | 100.0% | 63.5% |
| 3513343 | 304.109.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23,Ribosomal_L23eN | 0.57 | 42.0 | 4.01e-01 | 96.9% | 65.8% |
| 5079337 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 50.0 | 3.52e-01 | 100.0% | 45.2% |
| 5052115 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 42.0 | 4.39e-01 | 88.8% | 90.0% |
| 3643481 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 50.0 | 3.33e-01 | 100.0% | 43.2% |
| 3424312 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.55 | 49.0 | 3.54e-01 | 100.0% | 40.1% |
| 4943533 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.55 | 42.0 | 3.66e-01 | 84.7% | 62.5% |
| 3610776 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 47.0 | 3.46e-01 | 98.0% | 64.3% |
| 3702551 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 48.0 | 3.24e-01 | 100.0% | 43.1% |
| 3968919 | 304.4.1.57 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MFS_3 | 0.54 | 45.0 | 4.19e-01 | 95.9% | 72.0% |
| 5035978 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.54 | 48.0 | 3.83e-01 | 100.0% | 68.0% |
| 4410192 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.54 | 46.0 | 3.47e-01 | 95.9% | 60.0% |
| 3775073 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 46.0 | 3.47e-01 | 98.0% | 53.1% |
| 5010455 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 47.0 | 3.67e-01 | 99.0% | 60.3% |
| 3614830 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.53 | 47.0 | 3.38e-01 | 99.0% | 53.8% |
| 3976466 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.53 | 41.0 | 3.62e-01 | 84.7% | 58.7% |
| 3720011 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 45.0 | 3.16e-01 | 98.0% | 46.6% |
| 3589979 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.52 | 40.0 | 3.88e-01 | 82.7% | 87.3% |
| 4061533 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.51 | 40.0 | 3.45e-01 | 84.7% | 60.6% |
| 4028769 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 46.0 | 3.71e-01 | 100.0% | 62.6% |
| 5047357 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.51 | 40.0 | 3.46e-01 | 84.7% | 59.4% |
| 4973784 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.51 | 41.0 | 2.71e-01 | 85.7% | 32.1% |
| 3811471 | 2003.1.2.34 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Prenylcys_lyase | 0.51 | 36.0 | 3.76e-01 | 89.8% | 81.1% |
| 5007985 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.50 | 39.0 | 3.47e-01 | 84.7% | 56.9% |
| 4943593 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.50 | 40.0 | 3.60e-01 | 86.7% | 87.9% |
| 3966778 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.50 | 40.0 | 3.34e-01 | 86.7% | 82.9% |
| 4319179 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.50 | 39.0 | 3.36e-01 | 84.7% | 58.1% |
| 3611249 | 230.4.1.0 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like | 0.50 | 38.0 | 3.15e-01 | 100.0% | 43.2% |
| 4996837 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.50 | 39.0 | 3.32e-01 | 85.7% | 51.8% |
D2
medium
residues 79-154_254-315
Domain cluster:
rep: PH2015_22_scaffold_1_prodigal-single.1__X__X__00198__D198-304_368-418_510-533
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00521.27 best | DNA_topoisoIV | 46.7 | 3.00e-12 | 65.2% | 19.0% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xcqA02 | 3.90.199.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase II; domain 5 › Topoisomerase II, domain 5 | 0.92 | 68.0 | 5.21e-01 | 87.7% | 38.4% |
| 1bjtA05 | 3.90.199.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase II; domain 5 › Topoisomerase II, domain 5 | 0.84 | 51.0 | 4.09e-01 | 85.5% | 33.7% |
| 1kv9A02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.52 | 32.0 | 3.64e-01 | 73.2% | 81.6% |
| 1jgsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 31.0 | 3.16e-01 | 90.6% | 61.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965475 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.94 | 65.0 | 5.50e-01 | 70.3% | 98.5% |
| 4024263 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.94 | 65.0 | 5.44e-01 | 71.0% | 98.1% |
| 3590557 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.93 | 65.0 | 5.65e-01 | 71.7% | 93.3% |
| 4855517 | 101.1.2.9 ↗ | alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV | 0.87 | 60.0 | 4.93e-01 | 70.3% | 77.4% |
| 3998667 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.78 | 64.0 | 5.63e-01 | 86.2% | 98.5% |
| 3614277 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.77 | 55.0 | 4.98e-01 | 73.9% | 93.3% |
| 3220665 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.76 | 53.0 | 4.80e-01 | 71.0% | 97.7% |
| 3719735 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.74 | 52.0 | 4.86e-01 | 71.7% | 99.4% |
| 3789606 | 4014.1.1.0 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase | 0.73 | 50.0 | 4.65e-01 | 70.3% | 97.6% |
| 4618205 | 604.1.1.150 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954 | 0.59 | 31.0 | 3.30e-01 | 74.6% | 58.3% |
| 4937431 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.52 | 41.0 | 3.87e-01 | 81.9% | 73.9% |
D3
medium
residues 428-542
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1suuA00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.81 | 63.0 | 4.57e-01 | 93.9% | 32.1% |
| 3l6vA00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.72 | 61.0 | 4.34e-01 | 94.8% | 32.6% |
| 3uc1A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.72 | 59.0 | 4.26e-01 | 93.9% | 33.0% |
| 1wp5A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.68 | 54.0 | 3.88e-01 | 93.9% | 30.1% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 35.0 | 4.17e-01 | 93.0% | 81.0% |
| 3no0A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.60 | 51.0 | 3.88e-01 | 93.9% | 54.0% |
| 1hskA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.52 | 33.0 | 3.25e-01 | 93.9% | 58.3% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4429482 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.82 | 73.0 | 5.09e-01 | 100.0% | 32.2% |
| 4589818 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.82 | 70.0 | 4.97e-01 | 95.7% | 33.8% |
| 4602375 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.81 | 72.0 | 4.96e-01 | 100.0% | 30.9% |
| 5040277 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.81 | 73.0 | 5.09e-01 | 100.0% | 33.5% |
| 5053478 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.81 | 72.0 | 5.08e-01 | 100.0% | 34.3% |
| 4102294 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.81 | 72.0 | 5.08e-01 | 100.0% | 34.3% |
| 3959000 | 5.2.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel | 0.80 | 72.0 | 5.73e-01 | 100.0% | 51.7% |
| 5082153 | 5.2.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel | 0.80 | 68.0 | 4.83e-01 | 93.9% | 32.9% |
| 4261933 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.80 | 72.0 | 5.04e-01 | 100.0% | 33.8% |
| 4075947 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.80 | 65.0 | 5.00e-01 | 99.1% | 41.3% |
| 3445642 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.80 | 71.0 | 4.92e-01 | 100.0% | 31.3% |
| 4331124 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.80 | 71.0 | 4.83e-01 | 100.0% | 29.6% |
| 4271590 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.79 | 71.0 | 5.01e-01 | 100.0% | 34.1% |
| 4279289 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.79 | 70.0 | 4.91e-01 | 100.0% | 33.2% |
| 4505869 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.78 | 70.0 | 4.93e-01 | 100.0% | 34.3% |
| 4186650 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.77 | 66.0 | 4.70e-01 | 96.5% | 33.1% |
| 4074611 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.76 | 65.0 | 4.64e-01 | 95.7% | 33.1% |
| 4935505 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.76 | 65.0 | 4.63e-01 | 95.7% | 33.8% |
| 4493828 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.76 | 60.0 | 4.36e-01 | 93.9% | 32.8% |
| 4606923 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.76 | 67.0 | 4.67e-01 | 100.0% | 32.4% |
| 4388717 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.75 | 67.0 | 4.74e-01 | 100.0% | 34.3% |
| 4946214 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.74 | 65.0 | 4.61e-01 | 100.0% | 32.9% |
| 4150603 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.74 | 64.0 | 4.57e-01 | 96.5% | 33.1% |
| 5007962 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.73 | 62.0 | 4.56e-01 | 97.4% | 36.2% |
| 4250515 | 5.2.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel | 0.72 | 57.0 | 4.40e-01 | 94.8% | 39.1% |
| 3164811 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.70 | 59.0 | 4.45e-01 | 93.9% | 40.0% |
| 5024979 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.70 | 56.0 | 4.08e-01 | 93.9% | 31.9% |
| 5059693 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.69 | 58.0 | 4.25e-01 | 94.8% | 34.3% |
| 4177906 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.68 | 57.0 | 4.10e-01 | 94.8% | 32.9% |
| 2179 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.68 | 54.0 | 3.88e-01 | 93.9% | 30.0% |
| 4410663 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.67 | 53.0 | 4.16e-01 | 93.9% | 40.0% |
| 4214118 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.66 | 52.0 | 3.91e-01 | 93.9% | 34.4% |
| 4609257 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.64 | 52.0 | 3.74e-01 | 93.9% | 30.6% |
| 4569696 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.62 | 56.0 | 4.03e-01 | 99.1% | 88.4% |
| 3969629 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.61 | 54.0 | 4.15e-01 | 95.7% | 56.5% |
| 4128974 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.54 | 33.0 | 3.93e-01 | 75.7% | 90.0% |
D4
medium
residues 543-646
Domain cluster:
rep: SRR1747035_scaffold_2_prodigal-single.1__X__X__00087__D1-93
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03989.19 best | DNA_gyraseA_C | 20.2 | 4.40e-04 | 46.2% | 95.8% |
| PF03989.19 | DNA_gyraseA_C | 26.6 | 4.30e-06 | 43.3% | 89.6% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l6vA00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.92 | 88.0 | 6.00e-01 | 100.0% | 33.2% |
| 3no0A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.90 | 84.0 | 5.91e-01 | 100.0% | 36.6% |
| 3uc1A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.90 | 86.0 | 5.93e-01 | 100.0% | 35.0% |
| 1wp5A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.89 | 85.0 | 5.76e-01 | 100.0% | 32.6% |
| 1suuA00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.88 | 84.0 | 5.84e-01 | 100.0% | 48.1% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 40.0 | 4.59e-01 | 94.2% | 83.5% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 44.0 | 4.96e-01 | 93.3% | 92.5% |
| 1i9gA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.63 | 35.0 | 4.18e-01 | 87.5% | 84.4% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 40.0 | 4.31e-01 | 97.1% | 85.1% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.59 | 32.0 | 3.80e-01 | 87.5% | 83.9% |
| 5owvD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 36.0 | 2.86e-01 | 99.0% | 29.3% |
| 3dlqR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 4.24e-01 | 94.2% | 78.0% |
| 6m3aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 32.0 | 3.86e-01 | 93.3% | 84.8% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.55 | 38.0 | 3.67e-01 | 86.5% | 61.7% |
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.54 | 41.0 | 4.29e-01 | 92.3% | 88.5% |
| 1x4zA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.79e-01 | 93.3% | 77.0% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.51 | 36.0 | 3.81e-01 | 74.0% | 81.9% |
| 2gqtA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.50 | 37.0 | 3.57e-01 | 100.0% | 66.9% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 36.0 | 3.75e-01 | 90.4% | 79.6% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4569696 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.95 | 91.0 | 6.15e-01 | 100.0% | 32.8% |
| 4186650 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.94 | 90.0 | 6.08e-01 | 100.0% | 32.8% |
| 4606923 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.93 | 89.0 | 5.97e-01 | 100.0% | 31.2% |
| 4946214 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.93 | 89.0 | 6.03e-01 | 100.0% | 32.6% |
| 4150603 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.93 | 89.0 | 6.03e-01 | 100.0% | 32.8% |
| 4331124 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.93 | 89.0 | 5.84e-01 | 100.0% | 29.0% |
| 4279289 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.93 | 88.0 | 5.94e-01 | 100.0% | 31.7% |
| 4074611 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.93 | 88.0 | 5.99e-01 | 100.0% | 32.8% |
| 4935505 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 89.0 | 6.08e-01 | 100.0% | 49.8% |
| 4271590 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 89.0 | 6.00e-01 | 100.0% | 32.8% |
| 3445642 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 88.0 | 5.87e-01 | 100.0% | 30.1% |
| 5040277 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 88.0 | 5.95e-01 | 100.0% | 47.1% |
| 4429482 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 88.0 | 5.91e-01 | 100.0% | 35.2% |
| 5024979 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 87.0 | 5.96e-01 | 100.0% | 33.2% |
| 4388717 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 87.0 | 5.94e-01 | 100.0% | 32.7% |
| 4602375 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 88.0 | 5.84e-01 | 100.0% | 30.3% |
| 5059693 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 88.0 | 6.06e-01 | 100.0% | 36.7% |
| 5007962 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 84.0 | 5.82e-01 | 95.2% | 35.5% |
| 4589818 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 88.0 | 6.03e-01 | 100.0% | 34.1% |
| 4261933 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 88.0 | 5.95e-01 | 100.0% | 32.5% |
| 5053478 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.91 | 87.0 | 5.93e-01 | 100.0% | 33.0% |
| 4505869 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.91 | 86.0 | 5.89e-01 | 100.0% | 48.6% |
| 5082153 | 5.2.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel | 0.90 | 86.0 | 5.92e-01 | 100.0% | 33.5% |
| 4102294 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 86.0 | 5.86e-01 | 100.0% | 47.6% |
| 4214118 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 84.0 | 5.92e-01 | 100.0% | 36.6% |
| 4177906 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.89 | 85.0 | 5.83e-01 | 100.0% | 38.4% |
| 2179 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.89 | 85.0 | 5.76e-01 | 100.0% | 32.5% |
| 4493828 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.89 | 84.0 | 5.91e-01 | 100.0% | 35.9% |
| 4421198 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.88 | 83.0 | 6.48e-01 | 100.0% | 72.2% |
| 4028934 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.87 | 84.0 | 5.79e-01 | 100.0% | 49.2% |
| 4609257 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.87 | 83.0 | 5.63e-01 | 100.0% | 46.6% |
| 4410663 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.87 | 78.0 | 5.77e-01 | 100.0% | 40.8% |
| 4075947 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.86 | 77.0 | 5.78e-01 | 100.0% | 42.1% |
| 3959000 | 5.2.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel | 0.85 | 76.0 | 5.93e-01 | 95.2% | 49.3% |
| 3969629 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.84 | 79.0 | 5.77e-01 | 100.0% | 62.4% |
| 3164811 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.83 | 77.0 | 5.65e-01 | 100.0% | 62.0% |
| 4250515 | 5.2.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel | 0.82 | 76.0 | 5.58e-01 | 99.0% | 42.3% |
| 2526350 | 1.17.1.0 ↗ | beta barrels › cradle loop barrel | 0.65 | 44.0 | 5.09e-01 | 92.3% | 96.1% |
| 3943690 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 36.0 | 4.54e-01 | 84.6% | 96.6% |
| 3561485 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 40.0 | 4.36e-01 | 97.1% | 82.4% |
| 3885093 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.59 | 41.0 | 4.47e-01 | 100.0% | 89.4% |
| 1479 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.59 | 40.0 | 4.31e-01 | 97.1% | 85.1% |
| 3888090 | 11.1.1.794 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LIFR_D4 | 0.58 | 41.0 | 4.33e-01 | 97.1% | 83.3% |
| 3935844 | 5.1.3.204 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7911 | 0.58 | 52.0 | 3.68e-01 | 100.0% | 88.6% |
| 5034410 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 4.28e-01 | 100.0% | 84.0% |
| 5033341 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 32.0 | 3.34e-01 | 94.2% | 61.0% |
| 2709685 | 221.1.1.17 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Stap_Strp_tox_C | 0.51 | 37.0 | 3.69e-01 | 90.4% | 72.9% |
| 5013637 | 221.1.3.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain › Oxidored_molyb | 0.51 | 41.0 | 3.55e-01 | 87.5% | 93.3% |
| 4033546 | 221.1.1.20 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › MAP | 0.50 | 36.0 | 3.58e-01 | 90.4% | 70.9% |
D5
medium
residues 647-749
Domain cluster:
rep: term1_saliva_scaffold_5_curated_closed_gap_prodigal-single.1__X__X__00125__D400-419_433-551
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03989.19 best | DNA_gyraseA_C | 28.7 | 9.80e-07 | 49.5% | 97.9% |
| PF03989.19 | DNA_gyraseA_C | 13.5 | 5.50e-02 | 46.6% | 79.2% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3no0A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.90 | 81.0 | 5.70e-01 | 100.0% | 35.1% |
| 1suuA00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.90 | 84.0 | 5.82e-01 | 100.0% | 34.5% |
| 3l6vA00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.89 | 84.0 | 5.73e-01 | 100.0% | 32.6% |
| 3uc1A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.88 | 84.0 | 5.78e-01 | 100.0% | 34.7% |
| 1wp5A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.87 | 83.0 | 5.63e-01 | 100.0% | 32.3% |
| 1i9gA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.66 | 36.0 | 4.37e-01 | 92.2% | 84.4% |
| 1o54A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.64 | 35.0 | 4.10e-01 | 92.2% | 75.0% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 44.0 | 4.85e-01 | 99.0% | 92.5% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 39.0 | 4.37e-01 | 99.0% | 87.3% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 3.93e-01 | 92.2% | 82.5% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 39.0 | 4.13e-01 | 99.0% | 87.4% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 40.0 | 4.30e-01 | 95.1% | 91.0% |
| 1wzoB02 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.54 | 44.0 | 3.65e-01 | 91.3% | 78.8% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.53 | 34.0 | 3.54e-01 | 74.8% | 70.2% |
| 3dlqR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.96e-01 | 99.0% | 78.0% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 31.0 | 3.37e-01 | 98.1% | 67.0% |
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 38.0 | 3.58e-01 | 99.0% | 64.2% |
| 1hskA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 35.0 | 3.29e-01 | 100.0% | 56.7% |
| 1a21B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.75e-01 | 96.1% | 78.6% |
| 4pytA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.50 | 35.0 | 3.33e-01 | 100.0% | 57.8% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4935505 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.94 | 87.0 | 5.93e-01 | 100.0% | 32.5% |
| 4186650 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.93 | 88.0 | 5.95e-01 | 100.0% | 32.2% |
| 4388717 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.93 | 88.0 | 5.93e-01 | 100.0% | 32.1% |
| 5053478 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 89.0 | 6.01e-01 | 100.0% | 32.7% |
| 4589818 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 86.0 | 5.88e-01 | 99.0% | 32.8% |
| 4279289 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 87.0 | 5.84e-01 | 100.0% | 31.1% |
| 5082153 | 5.2.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel | 0.92 | 88.0 | 5.96e-01 | 100.0% | 32.9% |
| 4569696 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 87.0 | 5.84e-01 | 100.0% | 31.6% |
| 4261933 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.92 | 87.0 | 5.89e-01 | 100.0% | 31.9% |
| 4150603 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.91 | 87.0 | 5.87e-01 | 100.0% | 31.9% |
| 4214118 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.91 | 84.0 | 5.89e-01 | 100.0% | 35.5% |
| 5024979 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.91 | 85.0 | 5.77e-01 | 100.0% | 32.3% |
| 4074611 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.91 | 86.0 | 5.85e-01 | 100.0% | 32.5% |
| 4102294 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.91 | 86.0 | 5.85e-01 | 100.0% | 32.4% |
| 5040277 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.91 | 87.0 | 5.85e-01 | 100.0% | 33.5% |
| 4606923 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.91 | 87.0 | 5.83e-01 | 100.0% | 31.8% |
| 4602375 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 87.0 | 5.74e-01 | 100.0% | 37.4% |
| 4429482 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 85.0 | 5.68e-01 | 99.0% | 30.1% |
| 3445642 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 86.0 | 5.74e-01 | 100.0% | 35.4% |
| 4331124 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 86.0 | 5.64e-01 | 100.0% | 41.4% |
| 4493828 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 83.0 | 5.74e-01 | 100.0% | 34.1% |
| 4946214 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 86.0 | 5.80e-01 | 100.0% | 32.9% |
| 4177906 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 85.0 | 5.84e-01 | 100.0% | 33.5% |
| 4505869 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 84.0 | 5.71e-01 | 100.0% | 32.1% |
| 4271590 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.90 | 86.0 | 5.80e-01 | 100.0% | 33.8% |
| 5059693 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.89 | 85.0 | 5.87e-01 | 100.0% | 35.3% |
| 4609257 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.88 | 82.0 | 5.56e-01 | 100.0% | 31.2% |
| 4421198 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.88 | 83.0 | 6.43e-01 | 100.0% | 51.2% |
| 5007962 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.87 | 82.0 | 5.72e-01 | 99.0% | 35.9% |
| 2179 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.87 | 83.0 | 5.62e-01 | 100.0% | 32.2% |
| 4075947 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.87 | 77.0 | 5.73e-01 | 100.0% | 40.9% |
| 4028934 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.87 | 81.0 | 5.62e-01 | 100.0% | 34.2% |
| 4410663 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.83 | 75.0 | 5.55e-01 | 100.0% | 41.2% |
| 4250515 | 5.2.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel | 0.82 | 77.0 | 5.64e-01 | 100.0% | 42.3% |
| 3969629 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.81 | 76.0 | 5.54e-01 | 100.0% | 42.7% |
| 3164811 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.81 | 76.0 | 5.51e-01 | 100.0% | 41.2% |
| 3959000 | 5.2.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel | 0.80 | 74.0 | 5.76e-01 | 100.0% | 49.8% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 36.0 | 4.16e-01 | 95.1% | 92.9% |
| 5034410 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 4.23e-01 | 100.0% | 82.0% |
| 3885093 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 39.0 | 4.21e-01 | 100.0% | 90.6% |
| 3560830 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 39.0 | 4.14e-01 | 100.0% | 85.6% |
| 3248572 | 72.1.1.0 ↗ | beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like | 0.54 | 40.0 | 4.47e-01 | 100.0% | 100.0% |
| 3528768 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 38.0 | 4.06e-01 | 100.0% | 85.6% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 35.0 | 3.96e-01 | 94.2% | 92.0% |
| 3893503 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 36.0 | 3.70e-01 | 99.0% | 74.0% |
| 5038807 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.51 | 38.0 | 3.48e-01 | 79.6% | 92.1% |