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ALI_motif_gene_family_protein
Euk-VirAnomala_cuprea_entomopoxvirus
ALI_motif_gene_family_protein__YP_009001505__Anomala_cuprea_entomopoxvirus__62099
Identity
- Accession:
- YP_009001505 ↗
- Protein ID:
- ALI_motif_gene_family_protein
- Kingdom:
- euk
Quality
78.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Alphaentomopoxvirus›
Alphaentomopoxvirus_acuprea
TaxID: 62099
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-109
Domain cluster:
rep: IMGVR_UViG_3300000568_000096-3300000568-Draft_1006303631__D8-117
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 55.4 | 1.10e-14 | 89.5% | 90.6% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bm8A00 | 3.10.260.10 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain | 0.72 | 60.0 | 5.94e-01 | 100.0% | 86.9% |
| 1r8oB01 | 2.30.30.480 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 32.0 | 3.78e-01 | 85.3% | 65.2% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 27.0 | 3.08e-01 | 80.0% | 56.3% |
| 2de6A02 | 2.20.25.680 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 27.0 | 3.35e-01 | 89.5% | 74.1% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.56 | 26.0 | 3.15e-01 | 82.1% | 64.1% |
| 1z01A02 | 2.20.25.680 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 28.0 | 3.39e-01 | 89.5% | 75.4% |
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 36.0 | 3.65e-01 | 100.0% | 66.0% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.52 | 34.0 | 3.95e-01 | 97.9% | 90.0% |
| 1o9aA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.52 | 23.0 | 3.04e-01 | 78.9% | 81.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.91 | 82.0 | 7.78e-01 | 100.0% | 81.8% |
| 3968916 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.88 | 78.0 | 7.55e-01 | 100.0% | 84.8% |
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.77 | 69.0 | 6.80e-01 | 94.7% | 90.0% |
| 4954530 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.76 | 66.0 | 6.19e-01 | 95.8% | 93.0% |
| 3978692 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.69 | 62.0 | 5.33e-01 | 98.9% | 70.7% |
| 4072904 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.68 | 31.0 | 3.94e-01 | 75.8% | 72.7% |
| 4008588 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.68 | 59.0 | 5.61e-01 | 94.7% | 94.5% |
| 5073619 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.63 | 42.0 | 4.93e-01 | 73.7% | 100.0% |
| 4109469 | 101.1.9.30 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N | 0.63 | 42.0 | 4.81e-01 | 76.8% | 100.0% |
| 3786120 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 30.0 | 4.00e-01 | 90.5% | 88.0% |
| 4028521 | 101.1.9.30 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Pescadillo_N | 0.62 | 43.0 | 4.17e-01 | 77.9% | 64.8% |
| 1606334 | 4.10.1.0 ↗ | beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain | 0.53 | 34.0 | 3.93e-01 | 97.9% | 87.5% |
| 3321732 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 3.81e-01 | 85.3% | 75.0% |
| 3878040 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.51 | 36.0 | 2.52e-01 | 74.7% | 72.4% |
| 4620172 | 11.9.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase | 0.50 | 40.0 | 2.99e-01 | 90.5% | 75.5% |
D2
high
residues 173-284
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cs4A01 | 1.10.287.540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.70 | 30.0 | 4.30e-01 | 76.8% | 88.2% |
| 2jmlA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.61 | 42.0 | 4.68e-01 | 88.4% | 96.3% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.59 | 39.0 | 4.16e-01 | 84.8% | 76.8% |
| 3nxaB00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.58 | 38.0 | 4.04e-01 | 82.1% | 76.3% |
| 3n50B02 | 1.10.287.4280 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 25.0 | 3.16e-01 | 83.9% | 66.7% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.56 | 36.0 | 3.89e-01 | 82.1% | 76.8% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.52 | 26.0 | 3.40e-01 | 88.4% | 86.9% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.52 | 41.0 | 3.02e-01 | 86.6% | 72.6% |
| 2kdoA02 | 1.10.10.900 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › SBDS protein C-terminal domain, subdomain 1 | 0.52 | 32.0 | 3.71e-01 | 100.0% | 94.5% |
| 1eijA00 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.51 | 30.0 | 3.54e-01 | 75.9% | 87.5% |
| 3b34A03 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.51 | 36.0 | 3.19e-01 | 73.2% | 75.0% |
| 7vxrA01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.51 | 33.0 | 3.50e-01 | 97.3% | 75.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3597677 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.86 | 70.0 | 7.28e-01 | 84.8% | 93.3% |
| 3946107 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.82 | 64.0 | 6.97e-01 | 81.2% | 97.9% |
| 3613416 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.80 | 72.0 | 7.09e-01 | 96.4% | 99.2% |
| 3698242 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.80 | 66.0 | 6.36e-01 | 85.7% | 81.3% |
| 4028773 | 574.1.1.2 ↗ | alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp,PRP21_like_P | 0.66 | 30.0 | 2.69e-01 | 83.0% | 30.7% |
| 3897051 | 821.1.1.8 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › ANKLE2_3rd | 0.63 | 50.0 | 5.17e-01 | 84.8% | 94.3% |
| 3346187 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.61 | 36.0 | 4.44e-01 | 98.2% | 94.3% |
| 3597740 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.61 | 40.0 | 3.63e-01 | 85.7% | 49.3% |
| 3905461 | 148.1.3.371 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › BTB | 0.52 | 47.0 | 4.60e-01 | 100.0% | 98.3% |
| 2980438 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.51 | 41.0 | 3.33e-01 | 85.7% | 82.2% |
D3
medium
residues 110-169
Domain cluster:
representative