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ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00072
Bact-VirALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00072
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-98
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bcoA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.66 | 42.0 | 3.18e-01 | 79.2% | 27.5% |
| 3bg2A03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.56 | 38.0 | 3.85e-01 | 75.0% | 70.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3597909 | 5094.1.1.0 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like | 0.62 | 46.0 | 4.27e-01 | 77.1% | 61.7% |
| 3612801 | 2003.1.1.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Malic_M | 0.62 | 45.0 | 3.27e-01 | 79.2% | 90.2% |
| 5000270 | 3646.1.1.0 ↗ | alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters | 0.61 | 38.0 | 2.97e-01 | 77.1% | 27.3% |
| 3188962 | 1084.1.1.7 ↗ | extended segments › Photosystem II reaction center W protein, chloroplastic › Photosystem II reaction center W protein, chloroplastic › Photosystem II reaction center W protein, chloroplastic › Mpv17_PMP22 | 0.61 | 45.0 | 3.68e-01 | 95.8% | 42.3% |
| 3739839 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.60 | 38.0 | 3.67e-01 | 80.2% | 54.5% |
| 3488923 | 109.3.1.181 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Serinc | 0.59 | 39.0 | 3.39e-01 | 71.9% | 43.3% |
| 3972151 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 43.0 | 3.85e-01 | 81.2% | 71.9% |
| 3484869 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 40.0 | 2.99e-01 | 75.0% | 59.1% |
| 3615064 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.55 | 36.0 | 3.49e-01 | 74.0% | 56.5% |
| 3626481 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.55 | 37.0 | 3.59e-01 | 84.4% | 60.9% |
| 3204866 | 109.54.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › PF28770 | 0.53 | 37.0 | 2.62e-01 | 76.0% | 22.2% |
| 3230181 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 37.0 | 3.35e-01 | 85.4% | 54.6% |
| 3600712 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.51 | 33.0 | 3.45e-01 | 75.0% | 74.1% |
| 4807214 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.50 | 41.0 | 3.80e-01 | 91.7% | 98.4% |