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ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00155
Bact-VirALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00155
Identity
- Kingdom:
- phage
Quality
87.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 400-477
Domain cluster:
representative
CATH (69)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.79 | 72.0 | 6.99e-01 | 100.0% | 95.4% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.78 | 65.0 | 6.83e-01 | 98.7% | 100.0% |
| 2hcjB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.77 | 69.0 | 6.49e-01 | 98.7% | 94.7% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.76 | 70.0 | 6.38e-01 | 100.0% | 91.0% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.75 | 66.0 | 6.61e-01 | 97.4% | 100.0% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.74 | 64.0 | 6.56e-01 | 97.4% | 100.0% |
| 1zunB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.73 | 65.0 | 6.21e-01 | 98.7% | 94.4% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.73 | 59.0 | 5.39e-01 | 87.2% | 82.2% |
| 1shyA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.72 | 58.0 | 5.27e-01 | 85.9% | 83.3% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.72 | 58.0 | 5.17e-01 | 87.2% | 87.3% |
| 3q39B02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.72 | 64.0 | 5.72e-01 | 100.0% | 97.3% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.71 | 64.0 | 6.11e-01 | 100.0% | 94.5% |
| 3u28C00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.71 | 64.0 | 6.04e-01 | 100.0% | 85.9% |
| 2as9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 58.0 | 5.48e-01 | 88.5% | 88.3% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.71 | 64.0 | 5.29e-01 | 100.0% | 83.9% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.71 | 63.0 | 5.63e-01 | 100.0% | 73.0% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.70 | 61.0 | 4.96e-01 | 100.0% | 85.7% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 61.0 | 6.00e-01 | 98.7% | 100.0% |
| 6hhuA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 56.0 | 5.67e-01 | 89.7% | 88.5% |
| 2qggA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.67 | 59.0 | 5.64e-01 | 100.0% | 94.6% |
| 2ra1A04 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 58.0 | 5.38e-01 | 96.2% | 78.4% |
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.66 | 57.0 | 5.10e-01 | 100.0% | 98.2% |
| 3d2wA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 48.0 | 5.05e-01 | 82.1% | 84.7% |
| 1n71B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 44.0 | 3.40e-01 | 71.8% | 84.4% |
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 53.0 | 3.70e-01 | 92.3% | 41.2% |
| 2e8yA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 51.0 | 4.75e-01 | 94.9% | 72.3% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 53.0 | 5.11e-01 | 100.0% | 94.5% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 53.0 | 5.17e-01 | 100.0% | 100.0% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 50.0 | 4.73e-01 | 94.9% | 77.1% |
| 1el6A03 | 3.90.1160.10 | Alpha Beta › Alpha-Beta Complex › Baseplate Structural Protein Gp11; Chain: A, domain 3 › Baseplate structural protein gp11, finger domain | 0.59 | 43.0 | 3.92e-01 | 79.5% | 89.0% |
| 2d9oA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 44.0 | 4.12e-01 | 82.1% | 71.0% |
| 6k3lB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 43.0 | 4.12e-01 | 79.5% | 100.0% |
| 2e9wB05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.44e-01 | 88.5% | 93.4% |
| 4kx7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.57 | 49.0 | 3.61e-01 | 97.4% | 39.7% |
| 1ix2A00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 47.0 | 4.36e-01 | 92.3% | 80.4% |
| 2r7hB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 39.0 | 3.04e-01 | 70.5% | 83.6% |
| 1r3eA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.57 | 44.0 | 3.30e-01 | 87.2% | 63.8% |
| 4jcwA02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.56 | 44.0 | 4.23e-01 | 93.6% | 74.4% |
| 7zgmA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 43.0 | 3.13e-01 | 84.6% | 67.2% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.55 | 46.0 | 3.46e-01 | 96.2% | 34.1% |
| 2kzbA00 | 2.60.40.2830 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 45.0 | 4.10e-01 | 96.2% | 72.8% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 4.29e-01 | 89.7% | 86.7% |
| 6lxgA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 39.0 | 4.05e-01 | 78.2% | 89.0% |
| 5k3xA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 45.0 | 4.06e-01 | 94.9% | 73.5% |
| 2covG00 | 2.60.40.2450 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain | 0.54 | 40.0 | 3.90e-01 | 96.2% | 71.6% |
| 1yvuA02 | 2.30.340.10 | Mainly Beta › Roll › PAZ domain fold › PAZ domain superfamily | 0.54 | 47.0 | 4.46e-01 | 96.2% | 100.0% |
| 2x12A01 | 2.60.40.2010 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 45.0 | 3.41e-01 | 92.3% | 66.8% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.54 | 45.0 | 3.44e-01 | 97.4% | 40.0% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 40.0 | 3.90e-01 | 84.6% | 79.3% |
| 4pqqA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 46.0 | 3.70e-01 | 97.4% | 89.1% |
| 1es0A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.06e-01 | 92.3% | 81.8% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.53 | 43.0 | 3.62e-01 | 91.0% | 90.1% |
| 3wo4C03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.90e-01 | 92.3% | 82.0% |
| 5h5zA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 4.11e-01 | 89.7% | 88.6% |
| 2blfA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 3.93e-01 | 96.2% | 73.7% |
| 5z0uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.80e-01 | 94.9% | 86.3% |
| 1whoA00 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.52 | 42.0 | 4.01e-01 | 92.3% | 96.8% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 39.0 | 3.62e-01 | 79.5% | 86.0% |
| 2ofqA01 | 2.60.40.2500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.87e-01 | 98.7% | 75.3% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.52 | 40.0 | 2.52e-01 | 100.0% | 13.5% |
| 1rhfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.86e-01 | 85.9% | 79.1% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.51 | 41.0 | 3.91e-01 | 91.0% | 95.7% |
| 6vhiA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.85e-01 | 94.9% | 87.4% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.73e-01 | 100.0% | 99.2% |
| 2rttA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 40.0 | 3.69e-01 | 89.7% | 89.5% |
| 3on9A00 | 2.60.240.20 | Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › | 0.50 | 36.0 | 2.94e-01 | 76.9% | 67.5% |
| 3qt2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 42.0 | 3.78e-01 | 96.2% | 81.4% |
| 1v05A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.85e-01 | 91.0% | 89.6% |
| 1mfnA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 42.0 | 4.07e-01 | 100.0% | 88.2% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3978877 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.82 | 76.0 | 7.18e-01 | 100.0% | 86.7% |
| 3171970 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.80 | 66.0 | 6.29e-01 | 87.2% | 86.7% |
| 3744064 | 1.1.7.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN | 0.79 | 71.0 | 6.79e-01 | 97.4% | 95.6% |
| 3216247 | 1.1.7.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN | 0.79 | 70.0 | 6.63e-01 | 94.9% | 95.6% |
| 4060488 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.78 | 66.0 | 6.59e-01 | 100.0% | 90.0% |
| 4245518 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.78 | 65.0 | 6.62e-01 | 98.7% | 94.7% |
| 3594492 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 71.0 | 6.36e-01 | 100.0% | 86.7% |
| 4146985 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.77 | 70.0 | 6.16e-01 | 98.7% | 81.8% |
| 4943568 | 1.1.7.147 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP-eEF1A_C | 0.77 | 69.0 | 6.46e-01 | 98.7% | 91.6% |
| 4948817 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.77 | 69.0 | 4.37e-01 | 98.7% | 23.2% |
| 4028917 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 68.0 | 6.39e-01 | 98.7% | 90.5% |
| None | — | 0.75 | 60.0 | 3.92e-01 | 92.3% | 20.0% | |
| 3597282 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.75 | 67.0 | 6.69e-01 | 100.0% | 96.2% |
| 3996398 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 67.0 | 6.51e-01 | 100.0% | 91.8% |
| 4518787 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 64.0 | 6.57e-01 | 98.7% | 100.0% |
| 3389361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 67.0 | 6.29e-01 | 100.0% | 91.6% |
| 3596642 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 65.0 | 6.39e-01 | 100.0% | 90.6% |
| 4995824 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 63.0 | 6.49e-01 | 92.3% | 100.0% |
| 2161972 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 65.0 | 6.45e-01 | 100.0% | 92.8% |
| 3945528 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 67.0 | 6.72e-01 | 100.0% | 96.2% |
| 3967745 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 63.0 | 6.45e-01 | 100.0% | 98.7% |
| 2556060 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 65.0 | 6.56e-01 | 100.0% | 98.7% |
| 4944212 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.73 | 57.0 | 5.55e-01 | 84.6% | 81.8% |
| 4854964 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 64.0 | 6.23e-01 | 97.4% | 93.0% |
| 3387360 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 64.0 | 6.25e-01 | 100.0% | 89.4% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 65.0 | 6.20e-01 | 100.0% | 95.6% |
| 3387846 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.73 | 65.0 | 5.65e-01 | 100.0% | 73.3% |
| 3636050 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.72 | 58.0 | 5.10e-01 | 87.2% | 67.8% |
| 4988964 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.72 | 58.0 | 5.62e-01 | 85.9% | 83.5% |
| 5001727 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 64.0 | 6.39e-01 | 97.4% | 96.2% |
| 3929255 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.71 | 64.0 | 5.22e-01 | 100.0% | 91.7% |
| 4085589 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 63.0 | 6.30e-01 | 98.7% | 98.8% |
| 4263415 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.71 | 62.0 | 5.99e-01 | 100.0% | 85.6% |
| 4010630 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.71 | 63.0 | 3.94e-01 | 100.0% | 20.0% |
| 5022644 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 62.0 | 5.80e-01 | 97.4% | 83.2% |
| 4319764 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 62.0 | 5.51e-01 | 100.0% | 70.0% |
| 3978784 | 1.1.7.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_U32_C | 0.69 | 62.0 | 5.57e-01 | 100.0% | 77.8% |
| 2869319 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.69 | 61.0 | 5.70e-01 | 100.0% | 82.7% |
| 4983877 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.69 | 57.0 | 5.42e-01 | 88.5% | 84.4% |
| 3592708 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 61.0 | 4.87e-01 | 100.0% | 94.4% |
| 3555476 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 59.0 | 4.14e-01 | 94.9% | 62.4% |
| 4395520 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.69 | 61.0 | 5.73e-01 | 98.7% | 88.4% |
| 3535535 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 59.0 | 4.16e-01 | 94.9% | 63.7% |
| 3416144 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.69 | 59.0 | 4.28e-01 | 93.6% | 66.7% |
| 4519252 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.69 | 61.0 | 5.35e-01 | 98.7% | 73.0% |
| 4117582 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.69 | 61.0 | 5.22e-01 | 100.0% | 71.2% |
| 3491307 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 61.0 | 5.02e-01 | 100.0% | 98.6% |
| 5017568 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.68 | 61.0 | 6.06e-01 | 100.0% | 98.8% |
| 4883021 | 11.1.1.171 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 | 0.68 | 57.0 | 5.89e-01 | 92.3% | 98.6% |
| 4426297 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.68 | 59.0 | 5.03e-01 | 100.0% | 68.5% |
| 3393350 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 57.0 | 4.27e-01 | 94.9% | 44.4% |
| 3388311 | 1.1.7.100 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N | 0.67 | 57.0 | 5.61e-01 | 96.2% | 100.0% |
| 3725596 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.66 | 58.0 | 4.92e-01 | 94.9% | 67.2% |
| 1878750 | 11.1.1.171 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 | 0.66 | 57.0 | 5.37e-01 | 96.2% | 78.4% |
| 4967933 | 1.1.7.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › CTP-dep_RFKase | 0.66 | 55.0 | 4.74e-01 | 96.2% | 100.0% |
| 3421728 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 55.0 | 5.24e-01 | 100.0% | 83.2% |
| 3261759 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 52.0 | 5.14e-01 | 93.6% | 89.4% |
| 3275858 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 52.0 | 4.89e-01 | 96.2% | 86.3% |
| 5082763 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.61 | 49.0 | 4.81e-01 | 98.7% | 82.4% |
| 3390626 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 46.0 | 4.82e-01 | 83.3% | 100.0% |
| 3251635 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 52.0 | 4.74e-01 | 100.0% | 89.1% |
| 3509982 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.60 | 51.0 | 3.97e-01 | 97.4% | 51.9% |
| 3263988 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 51.0 | 4.99e-01 | 98.7% | 88.2% |
| 3389168 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.60 | 52.0 | 3.87e-01 | 97.4% | 44.4% |
| 3584940 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.60 | 51.0 | 3.74e-01 | 96.2% | 34.5% |
| 3265575 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.60 | 50.0 | 4.94e-01 | 97.4% | 88.2% |
| 3524352 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.60 | 50.0 | 3.64e-01 | 91.0% | 92.4% |
| 3313040 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.60 | 51.0 | 3.86e-01 | 97.4% | 42.5% |
| 3880041 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.59 | 49.0 | 3.58e-01 | 96.2% | 31.7% |
| 3259442 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.59 | 50.0 | 4.83e-01 | 97.4% | 86.7% |
| 4527829 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 50.0 | 4.72e-01 | 96.2% | 88.4% |
| 3270396 | 12.1.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C | 0.58 | 50.0 | 4.71e-01 | 98.7% | 80.0% |
| 5063671 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 45.0 | 4.38e-01 | 92.3% | 88.2% |
| 3858692 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.57 | 47.0 | 3.57e-01 | 92.3% | 92.3% |
| 1878 | 11.1.5.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 | 0.57 | 47.0 | 4.25e-01 | 94.9% | 90.9% |
| 3256508 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 46.0 | 4.55e-01 | 94.9% | 90.6% |
| 4150515 | 11.2.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_SHIP1-2_2nd | 0.56 | 42.0 | 3.48e-01 | 80.8% | 76.6% |
| 3933470 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.55 | 47.0 | 3.51e-01 | 98.7% | 35.8% |
| 3386507 | 11.1.1.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mo-co_dimer | 0.55 | 46.0 | 4.08e-01 | 93.6% | 75.7% |
| 5059827 | 11.1.1.171 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 | 0.55 | 45.0 | 4.14e-01 | 92.3% | 78.1% |
| 3392702 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.54 | 46.0 | 3.46e-01 | 98.7% | 42.8% |
| 3265818 | 11.1.1.914 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29344 | 0.54 | 43.0 | 4.14e-01 | 92.3% | 92.6% |
| 3933153 | 11.1.1.835 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Irg-7 | 0.53 | 44.0 | 3.91e-01 | 96.2% | 74.2% |
| 4265804 | 11.1.5.89 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF3707 | 0.52 | 45.0 | 3.60e-01 | 98.7% | 89.1% |
| 5028884 | 11.1.1.351 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD | 0.52 | 42.0 | 3.82e-01 | 89.7% | 81.8% |
| 4653283 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.52 | 42.0 | 3.16e-01 | 98.7% | 33.8% |
| 4308825 | 11.1.1.65 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CopC | 0.52 | 42.0 | 4.00e-01 | 91.0% | 80.0% |
| 3263989 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 4.09e-01 | 94.9% | 84.2% |
| 4881066 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.52 | 41.0 | 3.88e-01 | 89.7% | 83.0% |
| 3276481 | 11.1.1.914 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29344 | 0.51 | 41.0 | 3.77e-01 | 91.0% | 88.3% |
| 2430480 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.50 | 42.0 | 3.62e-01 | 97.4% | 80.3% |
| 3249576 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.50 | 42.0 | 4.16e-01 | 98.7% | 91.8% |
D2
medium
residues 192-396_479-534
Domain cluster:
rep: NC_006883.2__YP_214524.1__PSSM2_293__00293__D60-268
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07602.18 best | DUF1565 | 39.4 | 6.40e-10 | 24.1% | 23.0% |