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ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00193

Bact-Vir

ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00193

Identity

Kingdom:
phage

Quality

83.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-97_316-352
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k87A03 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.70 56.0 4.13e-01 85.7% 68.8%
7lvlA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 55.0 4.34e-01 93.2% 76.4%
6kikA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.65 57.0 4.48e-01 96.2% 87.3%
1gzjA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 50.0 3.87e-01 83.5% 63.8%
1vliA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 54.0 4.23e-01 95.5% 73.0%
1p0kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 55.0 4.21e-01 97.7% 78.4%
6fnuA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.61 54.0 4.20e-01 97.0% 87.8%
2x7vA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.61 52.0 4.12e-01 93.2% 87.4%
6fcxA01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.61 54.0 4.26e-01 97.0% 89.0%
4aeeA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 54.0 4.09e-01 97.7% 95.7%
3zo9A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 54.0 3.90e-01 98.5% 88.3%
1a5aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 54.0 4.37e-01 97.7% 78.8%
6gc1A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 42.0 3.72e-01 96.2% 49.2%
3b9oA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.60 54.0 3.83e-01 100.0% 96.5%
5m99A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 54.0 4.00e-01 100.0% 91.2%
5jx5A00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.60 54.0 4.08e-01 99.2% 82.0%
3k8kA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 53.0 3.93e-01 98.5% 88.2%
1rqeA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 52.0 4.07e-01 95.5% 79.2%
2pmqA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 52.0 4.39e-01 100.0% 79.9%
1tyyA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 53.0 4.07e-01 100.0% 52.5%
7wmzC01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.57 51.0 4.07e-01 100.0% 92.6%
6r62A00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.57 50.0 4.13e-01 97.7% 85.3%
2ps2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.57 51.0 4.25e-01 100.0% 78.2%
3ib6C00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.57 49.0 4.44e-01 93.2% 99.4%
3ssmC02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 45.0 3.93e-01 85.7% 89.6%
7pujA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 49.0 3.91e-01 97.0% 87.3%
4ov4A01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 50.0 3.96e-01 98.5% 60.1%
2rbcA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 51.0 3.91e-01 100.0% 87.3%
1qyiA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 47.0 4.28e-01 93.2% 97.8%
3k1zA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 47.0 4.45e-01 91.7% 98.7%
2c4kA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 49.0 4.61e-01 98.5% 98.8%
3lrtB01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 50.0 4.78e-01 99.2% 100.0%
5mp7A01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 50.0 4.68e-01 100.0% 99.4%
2om6A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 46.0 4.43e-01 91.7% 98.0%
2g1uA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 40.0 3.97e-01 75.2% 92.0%
3umoA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 48.0 3.73e-01 99.2% 88.7%
2ho4B01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 46.0 4.33e-01 91.0% 75.5%
1z4mA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 46.0 4.61e-01 92.5% 98.6%
2odaA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 46.0 4.09e-01 92.5% 96.4%
1d5cA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 49.0 4.61e-01 100.0% 99.4%
4jz5A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 48.0 4.21e-01 100.0% 69.4%
3go6A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 47.0 3.70e-01 100.0% 44.6%
4twbA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 48.0 4.65e-01 98.5% 100.0%
1cqxA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.53 44.0 4.38e-01 94.0% 84.5%
1cqzB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 45.0 4.49e-01 91.7% 99.3%
6ncrB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 48.0 4.01e-01 100.0% 88.4%
2ymmB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 44.0 4.26e-01 91.7% 96.8%
6h0cA02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.53 47.0 4.57e-01 100.0% 96.7%
2nyvA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 46.0 4.40e-01 94.7% 98.7%
2rdmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 43.0 4.50e-01 100.0% 96.0%
4hh3C02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.52 45.0 4.53e-01 100.0% 93.9%
4i0wB01 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.52 46.0 3.54e-01 100.0% 81.0%
4hi0E00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 47.0 4.14e-01 100.0% 98.5%
1vjrA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 42.0 4.09e-01 89.5% 93.5%
4l07A00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.51 45.0 3.88e-01 96.2% 90.4%
5jbdA03 3.20.20.470 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glucansucrase 0.51 46.0 3.31e-01 100.0% 89.3%
3knzA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 42.0 4.11e-01 97.7% 80.8%
6qp2A01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 45.0 3.77e-01 98.5% 64.1%
2wojC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 45.0 3.55e-01 98.5% 78.5%
1krhA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.50 42.0 4.20e-01 91.7% 88.8%
1gg4A01 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.50 42.0 4.20e-01 93.2% 89.7%
3nt7A00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.50 42.0 3.54e-01 89.5% 88.9%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5021440 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.66 56.0 4.55e-01 93.2% 89.7%
3838471 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.65 55.0 4.55e-01 93.2% 90.2%
3280635 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.64 55.0 4.56e-01 94.7% 91.4%
3496774 65.1.1.3 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_1 0.63 56.0 3.88e-01 100.0% 62.6%
3474706 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.62 56.0 3.96e-01 100.0% 68.2%
3167345 2002.1.1.90 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR 0.62 54.0 4.16e-01 96.2% 86.0%
3953216 2002.1.1.193 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR_2 0.62 55.0 4.24e-01 97.7% 97.7%
3458089 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 38.0 3.35e-01 73.7% 41.0%
4945466 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 44.0 3.78e-01 73.7% 55.3%
3264609 2002.1.1.150 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAGidase 0.62 54.0 4.03e-01 97.0% 69.8%
3798332 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 54.0 4.14e-01 96.2% 85.6%
4944694 7584.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins 0.61 45.0 3.26e-01 77.4% 33.2%
3275865 2007.6.1.11 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › GKRP_SIS_2 0.60 53.0 4.24e-01 96.2% 73.6%
5013520 2002.1.1.35 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DAHP_synth_1 0.60 52.0 4.16e-01 96.2% 73.5%
None 0.60 52.0 4.20e-01 96.2% 76.2%
3584316 2002.1.1.90 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR 0.59 49.0 3.81e-01 93.2% 76.9%
1340176 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.58 45.0 3.76e-01 84.2% 83.1%
3969623 2003.1.1.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N 0.58 53.0 4.60e-01 100.0% 98.5%
5049899 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 51.0 4.38e-01 98.5% 92.2%
3638653 2003.1.6.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 0.57 51.0 4.05e-01 97.7% 98.2%
3611193 2006.1.1.4 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF 0.57 49.0 4.09e-01 94.0% 66.4%
3468456 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.57 40.0 3.71e-01 73.7% 65.7%
3427973 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.57 42.0 3.77e-01 76.7% 55.1%
3274093 6108.1.1.11 alpha bundles › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Dynamin_N 0.57 51.0 3.30e-01 100.0% 41.0%
5004384 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 43.0 3.82e-01 80.5% 78.5%
3991870 2002.1.1.90 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR 0.56 49.0 3.91e-01 94.0% 77.7%
4991789 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.56 48.0 3.94e-01 94.0% 98.0%
5082378 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.56 48.0 3.89e-01 91.0% 82.4%
2163579 2002.1.1.161 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_97 0.56 49.0 3.96e-01 98.5% 85.3%
3211856 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.56 50.0 4.29e-01 100.0% 91.2%
3633649 7573.1.1.2 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran_N 0.56 50.0 4.35e-01 98.5% 95.0%
None 0.56 50.0 4.50e-01 97.7% 95.6%
4985856 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.56 47.0 3.86e-01 91.0% 85.8%
4012972 7573.1.1.2 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran_N 0.55 50.0 4.49e-01 99.2% 95.7%
3250562 2004.1.1.164 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.55 50.0 4.43e-01 100.0% 95.9%
4664948 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 50.0 4.71e-01 100.0% 97.6%
4984475 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.55 48.0 3.84e-01 97.7% 89.6%
3256797 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.55 50.0 4.53e-01 100.0% 90.6%
5045004 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.54 49.0 4.06e-01 100.0% 96.7%
3933628 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.54 49.0 4.52e-01 100.0% 97.1%
None 0.54 48.0 3.78e-01 99.2% 87.9%
3930561 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.54 49.0 4.41e-01 100.0% 91.4%
2499455 2007.1.14.6 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › CbiX 0.54 38.0 3.64e-01 72.2% 68.6%
None 0.54 48.0 4.18e-01 98.5% 89.8%
3623799 2006.1.6.5 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 0.54 48.0 4.16e-01 100.0% 96.3%
3927885 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.54 48.0 4.26e-01 98.5% 90.0%
3908866 2006.1.1.16 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like,Hydrolase_6 0.54 45.0 4.35e-01 92.5% 98.7%
3265349 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 48.0 4.24e-01 100.0% 85.9%
4211664 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.53 46.0 3.63e-01 98.5% 88.1%
5048881 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 48.0 4.49e-01 99.2% 98.8%
3933627 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.53 48.0 4.22e-01 100.0% 88.5%
3924010 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.53 48.0 4.39e-01 100.0% 96.6%
4164634 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.53 47.0 4.45e-01 100.0% 89.7%
3896439 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.53 45.0 4.11e-01 91.7% 87.4%
3937114 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.53 48.0 4.26e-01 100.0% 87.4%
3935413 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.53 47.0 4.21e-01 100.0% 87.2%
4041213 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.52 47.0 4.68e-01 99.2% 95.0%
4785836 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 46.0 4.28e-01 97.7% 92.4%
4254011 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.52 45.0 4.06e-01 97.0% 69.4%
3282119 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.51 41.0 4.17e-01 88.0% 93.3%
3164628 7570.1.1.1 a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C 0.51 44.0 4.34e-01 94.0% 91.4%
None 0.51 45.0 3.52e-01 100.0% 66.7%
4069318 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.51 45.0 4.34e-01 100.0% 85.3%
3220883 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.51 46.0 4.23e-01 100.0% 95.4%
5027428 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.51 46.0 4.11e-01 100.0% 79.5%
4257464 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.51 46.0 4.19e-01 100.0% 86.1%
3010946 7501.1.1.2 a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C 0.51 41.0 3.78e-01 88.0% 75.6%
4997686 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.51 46.0 4.09e-01 100.0% 78.9%
4132866 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.51 43.0 3.11e-01 93.2% 36.4%
4158826 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.50 45.0 3.76e-01 100.0% 77.5%
4001830 2006.1.1.16 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like,Hydrolase_6 0.50 42.0 4.06e-01 91.7% 97.4%
D2 high residues 115-314
PDB
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5enzA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.69 51.0 5.61e-01 99.0% 93.2%
1f0kA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.68 51.0 5.38e-01 97.5% 86.9%
4jgiB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.67 41.0 5.02e-01 89.5% 95.2%
4rk5A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 40.0 4.77e-01 91.0% 90.2%
2h3hA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 41.0 4.63e-01 93.5% 84.5%
2ozzA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.63 33.0 3.87e-01 90.0% 70.5%
1wviA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.61 42.0 4.87e-01 87.0% 97.9%
3tovA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 47.0 4.90e-01 92.0% 87.0%
2gt1A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 45.0 4.92e-01 88.0% 93.9%
1brmA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 44.0 4.98e-01 89.0% 99.3%
3jviA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 44.0 4.95e-01 95.0% 98.7%
4f6cB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 51.0 4.19e-01 93.5% 66.6%
1lu4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 33.0 3.97e-01 88.5% 81.3%
1ipaA02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.58 42.0 4.69e-01 91.0% 96.1%
3vrhA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.58 41.0 3.60e-01 72.0% 69.5%
1lqtA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 44.0 4.33e-01 92.5% 72.9%
4gkbA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 49.0 4.56e-01 93.5% 90.3%
1p99A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 30.0 3.50e-01 90.0% 70.1%
5u4qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 49.0 4.30e-01 95.5% 78.9%
5xtfA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 49.0 4.72e-01 95.0% 93.0%
5l9aB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 49.0 4.19e-01 95.0% 73.1%
3c4aA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 43.0 4.22e-01 95.0% 74.5%
3n05A02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 38.0 3.95e-01 84.0% 76.2%
2p6pB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.54 47.0 4.62e-01 93.0% 99.0%
2gn4B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 46.0 4.38e-01 97.0% 89.7%
1qmgB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 41.0 4.05e-01 91.5% 76.4%
1xq6A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 47.0 4.33e-01 97.0% 97.6%
2p9bA03 3.40.50.10910 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Amidohydrolase 0.52 31.0 3.86e-01 96.5% 96.0%
2c5sA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 38.0 3.81e-01 83.5% 73.9%
4xfjB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 39.0 4.13e-01 84.0% 89.0%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5003313 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.71 50.0 5.33e-01 100.0% 81.5%
5058638 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.70 58.0 5.64e-01 100.0% 79.1%
5062909 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.68 50.0 5.42e-01 99.0% 91.5%
3515781 7512.1.1.66 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Exostosin_GT47 0.66 53.0 5.42e-01 100.0% 87.9%
3383498 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.65 45.0 5.03e-01 91.5% 89.7%
3419697 7512.1.1.77 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_N 0.64 50.0 4.64e-01 82.0% 90.2%
3903723 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.64 57.0 4.18e-01 95.0% 57.5%
4004409 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.64 44.0 4.61e-01 88.0% 77.2%
5002548 7512.1.1.18 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycogen_syn 0.63 59.0 4.16e-01 100.0% 38.2%
5021400 7512.1.1.18 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycogen_syn 0.63 59.0 5.13e-01 100.0% 77.6%
3179983 2003.1.1.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4 0.62 55.0 4.28e-01 95.5% 61.9%
5003740 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.62 53.0 5.25e-01 90.5% 97.6%
3391960 2003.1.1.39 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP 0.62 55.0 4.44e-01 95.5% 91.8%
3597236 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.60 53.0 4.17e-01 94.0% 82.7%
4934582 2003.1.1.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog 0.60 49.0 5.24e-01 90.5% 100.0%
3210507 2003.1.1.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.59 52.0 4.29e-01 95.0% 65.5%
4164853 2003.1.1.39 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP 0.59 54.0 4.20e-01 97.0% 92.7%
4298089 2003.1.1.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4 0.59 51.0 4.20e-01 93.5% 67.9%
1307859 2003.1.1.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4 0.59 51.0 4.19e-01 93.5% 66.6%
4015837 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.59 52.0 4.23e-01 95.5% 65.9%
3945069 2007.19.1.1 a/b three-layered sandwiches › Flavodoxin-like › Glycerate kinase I (Pfam 02595) domain I › Glycerate kinase I (Pfam 02595) domain I › Gly_kinase 0.58 43.0 4.86e-01 90.0% 99.4%
3189601 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 50.0 4.62e-01 93.5% 93.7%
3623775 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 52.0 4.64e-01 100.0% 97.9%
5077280 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.57 48.0 4.82e-01 88.5% 99.5%
3790587 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 52.0 3.97e-01 100.0% 58.5%
3705449 2003.1.1.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.57 50.0 4.05e-01 95.5% 62.1%
4013467 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.56 49.0 4.25e-01 93.5% 71.0%
3281337 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.56 50.0 4.61e-01 96.0% 98.4%
5056873 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.55 44.0 3.49e-01 82.5% 75.0%
3737721 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.55 43.0 4.55e-01 89.5% 92.8%
3241043 246.2.1.3 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,Metallophos_C 0.53 46.0 4.00e-01 92.5% 97.7%
3449236 7579.1.1.5 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 0.53 41.0 3.58e-01 80.5% 87.6%
5016070 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.52 41.0 3.41e-01 83.5% 72.7%
5001159 2005.1.1.20 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.52 38.0 3.81e-01 83.5% 72.4%
4511732 2003.1.1.268 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PF27054 0.51 46.0 3.94e-01 96.5% 97.5%
4930592 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.51 41.0 3.99e-01 84.5% 80.9%
4991573 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.51 41.0 3.96e-01 84.5% 78.2%
3281499 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.51 40.0 3.95e-01 84.5% 75.9%
None 0.51 40.0 3.92e-01 84.5% 79.0%
4443198 2005.1.1.27 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.50 41.0 3.88e-01 85.0% 77.4%
None 0.50 40.0 3.86e-01 84.5% 79.1%