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ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00261
Bact-VirALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00261
Identity
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-68
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.77 | 37.0 | 2.91e-01 | 87.9% | 24.2% |
| 7jsnA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.67 | 32.0 | 2.25e-01 | 90.9% | 14.1% |
| 3mxqC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 44.0 | 3.51e-01 | 84.8% | 74.4% |
| 1vq0A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.52 | 37.0 | 2.54e-01 | 74.2% | 84.1% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.50 | 37.0 | 2.84e-01 | 80.3% | 56.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3491906 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.57 | 40.0 | 3.84e-01 | 72.7% | 92.0% |
| 5059491 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.57 | 43.0 | 3.03e-01 | 80.3% | 86.0% |
| 3629714 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.56 | 41.0 | 3.71e-01 | 80.3% | 82.1% |
| 2635091 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 40.0 | 2.97e-01 | 78.8% | 51.9% |
| 4537309 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.55 | 40.0 | 3.61e-01 | 78.8% | 71.6% |
| 3802532 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 35.0 | 2.45e-01 | 90.9% | 20.5% |
| 3994175 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.53 | 41.0 | 3.40e-01 | 87.9% | 67.7% |
| 3415741 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 46.0 | 3.62e-01 | 100.0% | 53.8% |
| 4389067 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.52 | 38.0 | 2.31e-01 | 100.0% | 11.2% |
| 4526883 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.50 | 41.0 | 3.58e-01 | 100.0% | 93.9% |