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ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00281
Bact-VirALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00281
Identity
- Kingdom:
- phage
Quality
59.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1235-1337
Domain cluster:
rep: MW478291.1__QTZ82904.1__phiCPD_00022__00022__D410-498
CATH (68)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vm9A02 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.75 | 61.0 | 6.23e-01 | 85.4% | 92.9% |
| 2ccvA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 58.0 | 5.96e-01 | 85.4% | 99.0% |
| 3wmqA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 57.0 | 5.99e-01 | 85.4% | 92.6% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 50.0 | 3.19e-01 | 87.4% | 14.7% |
| 6sl4A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.71 | 62.0 | 5.44e-01 | 94.2% | 72.0% |
| 2wstA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.70 | 62.0 | 5.25e-01 | 100.0% | 95.5% |
| 1g43A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.69 | 60.0 | 5.20e-01 | 95.1% | 73.8% |
| 2xbtA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.68 | 59.0 | 5.14e-01 | 95.1% | 70.3% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 59.0 | 5.63e-01 | 93.2% | 100.0% |
| 2ylkA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.67 | 59.0 | 5.22e-01 | 95.1% | 71.7% |
| 1tulA00 | 2.70.40.20 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Baculovirus telokin-like protein 20 | 0.66 | 57.0 | 5.78e-01 | 94.2% | 97.1% |
| 1gff200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 58.0 | 4.95e-01 | 100.0% | 86.4% |
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 58.0 | 5.86e-01 | 100.0% | 96.1% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 43.0 | 4.81e-01 | 87.4% | 91.0% |
| 3winE03 | 2.60.120.1090 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 52.0 | 5.12e-01 | 87.4% | 100.0% |
| 2bsyA01 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.64 | 56.0 | 5.01e-01 | 99.0% | 68.0% |
| 4n2oA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 55.0 | 4.49e-01 | 95.1% | 68.2% |
| 1df0A03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 50.0 | 4.60e-01 | 85.4% | 99.3% |
| 1dunA00 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.62 | 55.0 | 5.30e-01 | 99.0% | 85.0% |
| 3mtiB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 47.0 | 3.86e-01 | 80.6% | 85.0% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 52.0 | 4.99e-01 | 95.1% | 82.0% |
| 2vo8A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 52.0 | 4.76e-01 | 95.1% | 70.4% |
| 2w47A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 53.0 | 4.86e-01 | 97.1% | 81.5% |
| 7nitA06 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 53.0 | 4.58e-01 | 100.0% | 78.5% |
| 3so5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 48.0 | 4.83e-01 | 87.4% | 87.6% |
| 5x7qA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 51.0 | 4.82e-01 | 95.1% | 92.9% |
| 2x1wL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 47.0 | 4.75e-01 | 99.0% | 84.8% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.60 | 47.0 | 4.76e-01 | 84.5% | 95.1% |
| 3m86A00 | 2.60.40.2020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 48.0 | 4.68e-01 | 93.2% | 79.3% |
| 4exkA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 46.0 | 4.64e-01 | 88.3% | 82.7% |
| 3oq3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.63e-01 | 86.4% | 85.4% |
| 4of8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 45.0 | 4.59e-01 | 99.0% | 84.5% |
| 4nehA04 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.58 | 49.0 | 4.38e-01 | 95.1% | 68.2% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.69e-01 | 87.4% | 89.0% |
| 1cqkA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 45.0 | 4.60e-01 | 86.4% | 86.1% |
| 4ponA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 45.0 | 3.79e-01 | 82.5% | 84.3% |
| 4jb9H01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.27e-01 | 87.4% | 82.4% |
| 1es0A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 43.0 | 4.45e-01 | 86.4% | 85.9% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 38.0 | 4.28e-01 | 74.8% | 95.9% |
| 3e7jA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.57 | 49.0 | 3.60e-01 | 100.0% | 88.4% |
| 4lhsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 49.0 | 4.39e-01 | 97.1% | 82.6% |
| 3fbqA02 | 2.60.40.1640 | Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. | 0.57 | 48.0 | 4.39e-01 | 95.1% | 71.2% |
| 2wngA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.44e-01 | 85.4% | 82.2% |
| 1sppB00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.56 | 49.0 | 4.86e-01 | 100.0% | 100.0% |
| 2c5dC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.48e-01 | 87.4% | 85.6% |
| 1je6A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.39e-01 | 89.3% | 92.1% |
| 5a2fA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.36e-01 | 87.4% | 83.0% |
| 1sfpA00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.56 | 49.0 | 4.83e-01 | 100.0% | 98.2% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 4.22e-01 | 86.4% | 83.0% |
| 3f8uD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.45e-01 | 98.1% | 85.8% |
| 2petA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.29e-01 | 87.4% | 83.6% |
| 4kq7A01 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.55 | 46.0 | 4.07e-01 | 95.1% | 75.9% |
| 3demA03 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.55 | 46.0 | 4.52e-01 | 94.2% | 100.0% |
| 3fcsA04 | 2.60.40.1530 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 | 0.55 | 47.0 | 4.02e-01 | 95.1% | 69.8% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 4.31e-01 | 87.4% | 83.8% |
| 5jmfA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 46.0 | 3.46e-01 | 93.2% | 76.0% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.55 | 43.0 | 4.34e-01 | 84.5% | 85.8% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 3.83e-01 | 94.2% | 68.3% |
| 7me5A01 | 2.60.40.2170 | Mainly Beta › Sandwich › Immunoglobulin-like › Wnt, WIF domain | 0.54 | 46.0 | 4.32e-01 | 97.1% | 84.3% |
| 4mmhA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 46.0 | 3.53e-01 | 99.0% | 76.9% |
| 1s2kA00 | 2.60.120.700 | Mainly Beta › Sandwich › Jelly Rolls › Peptidase G1 | 0.54 | 42.0 | 3.42e-01 | 83.5% | 78.9% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.53 | 47.0 | 4.38e-01 | 100.0% | 89.4% |
| 3kq4B04 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.53 | 44.0 | 4.39e-01 | 93.2% | 100.0% |
| 4gafB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.24e-01 | 98.1% | 83.6% |
| 3zugB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.53 | 40.0 | 3.63e-01 | 81.6% | 67.6% |
| 3hp7A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 45.0 | 3.62e-01 | 97.1% | 71.0% |
| 4binA01 | 2.60.40.3500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.69e-01 | 78.6% | 92.2% |
| 2fd8A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.50 | 44.0 | 3.61e-01 | 100.0% | 86.9% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4121516 | 4182.1.1.2 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin | 0.76 | 61.0 | 6.13e-01 | 85.4% | 90.5% |
| 3715555 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.75 | 65.0 | 6.43e-01 | 94.2% | 92.6% |
| 1489395 | 4182.1.1.2 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin | 0.72 | 57.0 | 5.98e-01 | 85.4% | 92.6% |
| 4951753 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 51.0 | 5.44e-01 | 75.7% | 90.0% |
| 1066946 | 11.1.5.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_3 | 0.70 | 61.0 | 5.15e-01 | 95.1% | 67.6% |
| 1714453 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.69 | 55.0 | 5.79e-01 | 85.4% | 95.7% |
| 3604637 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.68 | 60.0 | 5.74e-01 | 100.0% | 82.6% |
| 5039890 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.67 | 60.0 | 5.29e-01 | 99.0% | 74.0% |
| 3621396 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 54.0 | 5.25e-01 | 90.3% | 86.1% |
| 3252755 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 51.0 | 4.78e-01 | 85.4% | 93.8% |
| 3820928 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.64 | 54.0 | 4.75e-01 | 92.2% | 100.0% |
| 3410864 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 46.0 | 4.39e-01 | 98.1% | 65.0% |
| 5082811 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 50.0 | 4.99e-01 | 87.4% | 81.9% |
| 3714052 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 48.0 | 4.84e-01 | 100.0% | 81.0% |
| 3908806 | 11.1.1.297 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 | 0.62 | 53.0 | 4.89e-01 | 94.2% | 72.6% |
| 5035459 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.62 | 48.0 | 5.19e-01 | 100.0% | 98.8% |
| 5041528 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 5.02e-01 | 100.0% | 83.8% |
| 5036992 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 51.0 | 5.02e-01 | 100.0% | 83.6% |
| 3666388 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 56.0 | 4.33e-01 | 100.0% | 93.5% |
| 3491554 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 55.0 | 5.10e-01 | 97.1% | 81.2% |
| 4944190 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.62 | 52.0 | 4.09e-01 | 94.2% | 96.0% |
| 3507757 | 11.1.1.385 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASH | 0.62 | 51.0 | 4.81e-01 | 92.2% | 75.2% |
| 3407771 | 10.32.1.235 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MBF2 | 0.61 | 46.0 | 4.82e-01 | 85.4% | 88.3% |
| 3934458 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 42.0 | 4.33e-01 | 74.8% | 75.8% |
| 5050287 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.61 | 49.0 | 5.25e-01 | 96.1% | 100.0% |
| 3759752 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.61 | 47.0 | 4.69e-01 | 98.1% | 81.9% |
| 4973765 | 3156.1.1.32 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Inhibitor_I42 | 0.61 | 44.0 | 4.44e-01 | 97.1% | 78.0% |
| 3258216 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.61 | 54.0 | 4.25e-01 | 100.0% | 69.8% |
| 2323933 | 10.32.1.58 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BPA_C | 0.61 | 52.0 | 4.86e-01 | 95.1% | 78.1% |
| 5029297 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 49.0 | 4.71e-01 | 87.4% | 84.9% |
| 3874965 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.60 | 46.0 | 4.66e-01 | 98.1% | 81.9% |
| 4954605 | 10.1.2.186 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF3344 | 0.60 | 50.0 | 4.77e-01 | 94.2% | 83.2% |
| 3183378 | 12.3.1.45 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2264_C | 0.60 | 51.0 | 3.77e-01 | 98.1% | 87.0% |
| 3701596 | 11.1.1.548 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD-like | 0.59 | 47.0 | 4.66e-01 | 86.4% | 80.9% |
| 3570828 | 389.1.1.119 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › BRINP | 0.59 | 51.0 | 4.55e-01 | 98.1% | 78.1% |
| 3230185 | 10.32.1.227 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glycoprotein | 0.59 | 50.0 | 4.96e-01 | 95.1% | 100.0% |
| 5007335 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.59 | 47.0 | 4.04e-01 | 86.4% | 63.0% |
| 3684940 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 49.0 | 4.75e-01 | 95.1% | 96.7% |
| 5059640 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 50.0 | 4.65e-01 | 98.1% | 75.4% |
| 3728644 | 12.3.1.45 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2264_C | 0.58 | 50.0 | 3.83e-01 | 100.0% | 86.7% |
| 3231570 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 51.0 | 4.97e-01 | 100.0% | 87.8% |
| 3791337 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 4.36e-01 | 100.0% | 77.3% |
| 5051357 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 50.0 | 4.41e-01 | 98.1% | 71.2% |
| 4937062 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 4.48e-01 | 87.4% | 80.9% |
| 5001856 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.58 | 46.0 | 4.29e-01 | 100.0% | 68.5% |
| 3885128 | 11.1.1.676 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_CFAP74_1st | 0.57 | 46.0 | 4.65e-01 | 88.3% | 89.0% |
| 3481106 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.57 | 50.0 | 4.36e-01 | 99.0% | 82.4% |
| 3923413 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.57 | 50.0 | 4.70e-01 | 100.0% | 95.3% |
| 3893166 | 10.4.1.23 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 | 0.57 | 48.0 | 4.65e-01 | 94.2% | 96.7% |
| 1144826 | 11.1.1.282 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF5643 | 0.57 | 48.0 | 4.39e-01 | 95.1% | 71.2% |
| 3242907 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.57 | 48.0 | 4.68e-01 | 94.2% | 98.3% |
| 4012639 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 45.0 | 4.49e-01 | 87.4% | 86.4% |
| 3619737 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.57 | 48.0 | 4.61e-01 | 95.1% | 98.3% |
| 3262641 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.57 | 49.0 | 3.88e-01 | 100.0% | 97.4% |
| 3255693 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.56 | 49.0 | 3.79e-01 | 100.0% | 65.5% |
| 4962172 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.17e-01 | 98.1% | 73.4% |
| 5044435 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 49.0 | 4.27e-01 | 100.0% | 92.7% |
| 3241496 | 11.1.5.94 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 | 0.56 | 48.0 | 4.20e-01 | 96.1% | 68.8% |
| 3495872 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 44.0 | 3.69e-01 | 85.4% | 53.8% |
| 3573728 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 48.0 | 4.61e-01 | 98.1% | 99.2% |
| 3869363 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.56 | 47.0 | 4.48e-01 | 93.2% | 93.3% |
| 412682 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.55 | 40.0 | 4.17e-01 | 100.0% | 84.0% |
| 5051273 | 12.3.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III | 0.55 | 47.0 | 3.66e-01 | 98.1% | 89.2% |
| 3242913 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.55 | 46.0 | 4.47e-01 | 100.0% | 83.5% |
| 3394051 | 12.2.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Vanin_C | 0.55 | 47.0 | 3.95e-01 | 99.0% | 92.6% |
| 3685807 | 11.1.1.885 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26747 | 0.55 | 43.0 | 4.31e-01 | 94.2% | 84.8% |
| 3601974 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.21e-01 | 93.2% | 72.3% |
| 5022898 | 10.34.1.0 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain | 0.54 | 37.0 | 3.94e-01 | 88.3% | 84.7% |
| 3668360 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.54 | 40.0 | 3.76e-01 | 81.6% | 64.4% |
| 3893006 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 4.21e-01 | 86.4% | 86.7% |
| 4298936 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.53 | 45.0 | 3.43e-01 | 100.0% | 89.5% |
| 3478219 | 12.1.1.94 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF4139 | 0.52 | 45.0 | 4.13e-01 | 94.2% | 91.1% |
| 3929255 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.52 | 41.0 | 3.70e-01 | 85.4% | 69.0% |
| 4537989 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.51 | 43.0 | 3.32e-01 | 100.0% | 92.6% |
| 4941016 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.51 | 36.0 | 3.58e-01 | 74.8% | 76.4% |
D2
medium
residues 323-340_1128-1204
D3
medium
residues 809-879
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 52.0 | 3.39e-01 | 100.0% | 54.6% |
| 2c4iA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.58 | 41.0 | 3.52e-01 | 74.6% | 83.9% |
| 4ku0D00 | 2.60.200.60 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.58 | 39.0 | 3.64e-01 | 71.8% | 81.2% |
| 1q67A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 42.0 | 3.42e-01 | 78.9% | 71.4% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.54 | 45.0 | 3.43e-01 | 93.0% | 53.4% |
| 5aq1A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 40.0 | 2.74e-01 | 81.7% | 67.7% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.51 | 43.0 | 2.62e-01 | 95.8% | 15.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3487487 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.61 | 50.0 | 3.73e-01 | 94.4% | 43.0% |
| 3481201 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.55 | 45.0 | 3.37e-01 | 94.4% | 43.1% |
| 3705742 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.53 | 34.0 | 3.65e-01 | 73.2% | 79.3% |
| 2323851 | 1196.1.1.0 ↗ | 0.53 | 42.0 | 2.88e-01 | 93.0% | 79.2% | |
| 3961802 | 243.5.1.9 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › UPF0182 | 0.52 | 43.0 | 3.26e-01 | 97.2% | 90.5% |
| 3963647 | 2.8.1.0 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C | 0.51 | 34.0 | 3.44e-01 | 70.4% | 92.0% |
D4
medium
residues 880-936
Domain cluster:
rep: PH2015_20_sub10_scaffold_1_prodigal-single.1__X__X__00214__D352-417
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.69 | 57.0 | 4.52e-01 | 93.0% | 66.9% |
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.68 | 52.0 | 4.46e-01 | 84.2% | 86.2% |
| 4le7A02 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.67 | 43.0 | 3.85e-01 | 70.2% | 46.3% |
| 3ltiA01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.67 | 51.0 | 3.69e-01 | 84.2% | 44.8% |
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.63 | 49.0 | 3.45e-01 | 86.0% | 56.2% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 43.0 | 3.85e-01 | 71.9% | 59.5% |
| 3mezD00 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.62 | 43.0 | 3.42e-01 | 71.9% | 58.0% |
| 4jcwA02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.57 | 38.0 | 3.31e-01 | 70.2% | 68.9% |
| 1euvA02 | 3.30.310.130 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Ubiquitin-related | 0.54 | 43.0 | 3.64e-01 | 93.0% | 97.1% |
| 3rioA01 | 2.30.24.10 | Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain | 0.53 | 38.0 | 3.61e-01 | 75.4% | 79.4% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 43.0 | 3.74e-01 | 89.5% | 72.4% |
| 3tc2B00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 40.0 | 2.92e-01 | 86.0% | 56.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3217200 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.76 | 60.0 | 3.72e-01 | 84.2% | 17.9% |
| 3494432 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.74 | 61.0 | 4.88e-01 | 93.0% | 60.5% |
| 4609923 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.72 | 63.0 | 4.81e-01 | 100.0% | 57.0% |
| 3744672 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.70 | 53.0 | 3.87e-01 | 84.2% | 88.5% |
| 3608699 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.70 | 61.0 | 4.50e-01 | 100.0% | 49.3% |
| 4467030 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.68 | 53.0 | 3.63e-01 | 86.0% | 39.5% |
| 3286940 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.67 | 51.0 | 3.85e-01 | 82.5% | 72.9% |
| 4212114 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.67 | 53.0 | 3.78e-01 | 86.0% | 45.1% |
| 3403585 | 77.3.1.6 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF30399 | 0.66 | 57.0 | 4.48e-01 | 100.0% | 72.0% |
| 4634766 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.65 | 47.0 | 3.43e-01 | 77.2% | 28.1% |
| 3773695 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.65 | 54.0 | 4.16e-01 | 94.7% | 49.6% |
| 3852105 | 63.1.1.8 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH, PRKCSH_1 | 0.65 | 54.0 | 4.14e-01 | 94.7% | 49.6% |
| 3585414 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.64 | 52.0 | 4.25e-01 | 93.0% | 56.4% |
| 3709736 | 5.1.4.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 | 0.61 | 50.0 | 3.12e-01 | 98.2% | 19.5% |
| 4003932 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.60 | 47.0 | 3.85e-01 | 93.0% | 50.8% |
| 4943946 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.60 | 41.0 | 3.58e-01 | 73.7% | 57.8% |
| 4051690 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.55 | 47.0 | 3.86e-01 | 96.5% | 65.7% |
| 3992808 | 5.1.4.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 | 0.54 | 42.0 | 2.72e-01 | 87.7% | 27.1% |
| 4011824 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.53 | 38.0 | 2.43e-01 | 82.5% | 63.7% |
| 4860818 | 212.1.1.10 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › RNase_PH | 0.51 | 33.0 | 3.14e-01 | 82.5% | 49.3% |