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ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00288
Bact-VirALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00288
Identity
- Kingdom:
- phage
Quality
76.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-59
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mtvA02 | 3.90.70.70 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Arterivirus papain-like cysteine protease beta domain | 0.63 | 46.0 | 3.63e-01 | 84.2% | 36.6% |
| 1uyvB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 43.0 | 2.81e-01 | 84.2% | 30.9% |
| 3vzbB02 | 2.60.200.40 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 39.0 | 2.68e-01 | 70.2% | 59.7% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.55 | 38.0 | 3.54e-01 | 77.2% | 55.3% |
| 3cz6A01 | 1.20.120.1480 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 38.0 | 3.27e-01 | 94.7% | 44.2% |
| 7zdgC02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 2.87e-01 | 93.0% | 47.0% |
| 5ekdA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.52 | 43.0 | 3.62e-01 | 100.0% | 53.2% |
| 3r7aB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.50 | 42.0 | 2.84e-01 | 94.7% | 61.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030552 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.79 | 58.0 | 5.06e-01 | 78.9% | 56.5% |
| 5040413 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.78 | 69.0 | 5.02e-01 | 100.0% | 87.7% |
| 4860588 | 7108.1.1.0 ↗ | alpha complex topology › Stl repressor, middle domain › Stl repressor, middle domain › Stl repressor, middle domain | 0.62 | 50.0 | 4.86e-01 | 91.2% | 95.4% |
| 3277144 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 45.0 | 3.84e-01 | 78.9% | 48.4% |
| 4575197 | 148.1.3.67 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RNA12 | 0.60 | 46.0 | 4.41e-01 | 87.7% | 77.1% |
| 3941103 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.60 | 47.0 | 4.54e-01 | 96.5% | 78.5% |
| 3465214 | 103.4.1.5 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 | 0.60 | 43.0 | 3.89e-01 | 77.2% | 71.2% |
| 3864511 | 109.2.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 | 0.55 | 45.0 | 3.08e-01 | 91.2% | 37.1% |
| 3603683 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.50 | 43.0 | 3.28e-01 | 100.0% | 62.1% |