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ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00344
Bact-VirALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00344
Identity
- Kingdom:
- phage
Quality
73.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-101
Domain cluster:
rep: IMGVR_UViG_3300000154_000252-3300000154-SI47jul10_150mDRAFT_10055545__D35-106
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vwaA00 | 1.20.58.1330 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein | 0.67 | 42.0 | 3.69e-01 | 82.6% | 44.4% |
| 1qhlA00 | 3.40.1140.10 | Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › | 0.60 | 46.0 | 3.39e-01 | 87.0% | 78.8% |
| 3b8mC02 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 40.0 | 3.50e-01 | 71.0% | 51.0% |
| 1b25A02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.55 | 46.0 | 3.49e-01 | 95.7% | 76.4% |
| 6w9rB01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 41.0 | 3.18e-01 | 81.2% | 56.0% |
| 5b3hC01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 24.0 | 2.83e-01 | 100.0% | 54.2% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.53 | 39.0 | 3.70e-01 | 89.9% | 64.7% |
| 6nd0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 37.0 | 3.32e-01 | 75.4% | 52.0% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.77e-01 | 87.0% | 78.3% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.52 | 39.0 | 3.34e-01 | 100.0% | 47.9% |
| 1ka1A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.52 | 42.0 | 3.06e-01 | 94.2% | 51.6% |
| 3ztvA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.50 | 37.0 | 2.37e-01 | 78.3% | 82.2% |
| 5eupA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.50 | 38.0 | 3.25e-01 | 84.1% | 70.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956228 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.60 | 51.0 | 4.95e-01 | 97.1% | 84.0% |
| 3746278 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.60 | 52.0 | 2.79e-01 | 100.0% | 9.9% |
| 3775826 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.58 | 43.0 | 3.42e-01 | 81.2% | 83.4% |
| 3964746 | 101.1.2.628 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26433 | 0.57 | 45.0 | 4.00e-01 | 88.4% | 85.7% |
| 4665476 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.55 | 47.0 | 3.41e-01 | 100.0% | 56.3% |
| 3498627 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.55 | 40.0 | 2.78e-01 | 79.7% | 56.1% |
| 3389471 | 148.1.3.9 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT | 0.55 | 47.0 | 4.71e-01 | 98.6% | 95.7% |
| 3545296 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 37.0 | 2.24e-01 | 71.0% | 10.1% |
| 3280925 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.55 | 37.0 | 2.61e-01 | 72.5% | 46.1% |
| 4934986 | 3054.1.1.0 ↗ | alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol | 0.54 | 40.0 | 3.38e-01 | 82.6% | 56.9% |
| 4972761 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 41.0 | 2.83e-01 | 81.2% | 94.1% |
| 4251053 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.54 | 39.0 | 2.74e-01 | 81.2% | 74.9% |
| 3690576 | 5001.1.1.32 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Solute_trans_a | 0.52 | 42.0 | 2.78e-01 | 94.2% | 45.6% |
| 3846614 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.52 | 37.0 | 2.02e-01 | 95.7% | 3.2% |
| 3856326 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.51 | 40.0 | 2.43e-01 | 85.5% | 13.5% |
| 5031076 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.51 | 38.0 | 3.28e-01 | 81.2% | 64.3% |