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ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00367
Bact-VirALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00367
Identity
- Kingdom:
- phage
Quality
85.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-328
Domain cluster:
rep: NC_015281.1__YP_004322760.1__SShM2_094__00094__D1-291
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14240.12 best | YHYH | 39.1 | 1.20e-09 | 35.1% | 57.0% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ttyA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 11.0 | 2.53e-01 | 81.8% | 71.0% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 12.0 | 2.85e-01 | 79.1% | 87.3% |
| 2lgnA00 | 2.60.40.2850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 11.0 | 2.47e-01 | 80.7% | 71.2% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 12.0 | 2.74e-01 | 79.1% | 85.0% |
| 2cg9X01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 17.0 | 2.71e-01 | 84.1% | 73.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4974151 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.52 | 13.0 | 2.38e-01 | 70.3% | 65.6% |
| 2874648 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 10.0 | 2.67e-01 | 70.3% | 91.5% |