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ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00373
Bact-VirALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00373
Identity
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-144
Domain cluster:
rep: SRR1747026_scaffold_22_prodigal-single.1__X__X__00189__D3-187
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jygA00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.78 | 67.0 | 6.13e-01 | 90.8% | 97.8% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.75 | 66.0 | 6.26e-01 | 92.9% | 97.5% |
| 2g2sA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.64 | 25.0 | 3.74e-01 | 99.3% | 81.2% |
| 4mb8D00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.62 | 57.0 | 4.48e-01 | 100.0% | 51.7% |
| 5l16A01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.54 | 30.0 | 3.26e-01 | 78.7% | 61.8% |
| 3ek7A01 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.54 | 46.0 | 3.87e-01 | 94.3% | 78.1% |
| 2pgeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 39.0 | 4.06e-01 | 87.2% | 82.7% |
| 4i2yA01 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.53 | 45.0 | 3.85e-01 | 93.6% | 76.3% |
| 3agrA01 | 3.30.420.530 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.53 | 38.0 | 3.31e-01 | 75.2% | 86.3% |
| 2dstA00 | 3.40.50.12270 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 30.0 | 3.23e-01 | 89.4% | 64.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4951815 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.84 | 73.0 | 7.53e-01 | 90.8% | 97.8% |
| 4234065 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.84 | 71.0 | 7.26e-01 | 88.7% | 98.6% |
| 4966109 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.83 | 71.0 | 7.30e-01 | 88.7% | 99.2% |
| 1917149 | 230.1.1.6 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF | 0.82 | 54.0 | 6.07e-01 | 90.8% | 85.3% |
| 5011135 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.79 | 69.0 | 6.96e-01 | 90.8% | 97.8% |
| 136695 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.78 | 67.0 | 6.16e-01 | 90.8% | 98.9% |
| 4987322 | 230.1.1.0 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like | 0.78 | 53.0 | 6.12e-01 | 92.9% | 97.0% |
| 4981604 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.74 | 65.0 | 6.35e-01 | 93.6% | 100.0% |
| 3218749 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.71 | 25.0 | 3.74e-01 | 86.5% | 73.3% |
| 3186130 | 230.1.1.4 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › FolB | 0.68 | 54.0 | 5.87e-01 | 93.6% | 98.3% |
| 3971974 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.66 | 47.0 | 5.34e-01 | 83.0% | 100.0% |
| 5029482 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.65 | 26.0 | 3.35e-01 | 86.5% | 62.5% |
| 4354607 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.63 | 51.0 | 5.43e-01 | 93.6% | 100.0% |
| 3971937 | 230.5.1.0 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain | 0.63 | 48.0 | 5.18e-01 | 83.7% | 95.0% |
| 3418267 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.61 | 35.0 | 3.74e-01 | 83.7% | 64.2% |
| 3998793 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.59 | 46.0 | 4.47e-01 | 84.4% | 73.8% |
| 3225074 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.58 | 35.0 | 3.89e-01 | 83.7% | 75.5% |
| 3201142 | 223.2.1.25 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 | 0.57 | 33.0 | 3.62e-01 | 75.2% | 68.7% |
| 5065725 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 40.0 | 3.37e-01 | 93.6% | 45.1% |
| 5062029 | 210.2.1.3 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 | 0.52 | 44.0 | 3.63e-01 | 92.9% | 66.9% |
| 3250857 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 25.0 | 3.15e-01 | 83.0% | 74.4% |
| 4101589 | 212.1.1.17 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFG_IV | 0.51 | 32.0 | 3.51e-01 | 83.7% | 75.7% |
| 4987303 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.51 | 34.0 | 3.88e-01 | 99.3% | 90.5% |
| 4520424 | 212.1.1.17 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFG_IV | 0.50 | 31.0 | 3.24e-01 | 83.7% | 65.2% |