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ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00071
Bact-VirALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00071
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-105
Domain cluster:
rep: BML_coassembly_scaffold_25_prodigal-single.1__X__X__00459__D4-112
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13744.13 best | HTH_37 | 35.3 | 1.10e-08 | 80.6% | 75.0% |
| PF13443.13 | HTH_26 | 28.3 | 2.30e-06 | 53.4% | 79.4% |
| PF01381.29 | HTH_3 | 40.0 | 4.40e-10 | 52.4% | 90.9% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.88 | 51.0 | 6.42e-01 | 82.5% | 92.4% |
| 2kpjA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.86 | 55.0 | 6.67e-01 | 79.6% | 95.7% |
| 4ghjB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.84 | 57.0 | 6.67e-01 | 80.6% | 94.7% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.83 | 52.0 | 6.56e-01 | 94.2% | 100.0% |
| 2bnmA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.82 | 58.0 | 6.79e-01 | 73.8% | 100.0% |
| 6b9sB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.82 | 55.0 | 6.40e-01 | 86.4% | 95.9% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 56.0 | 6.55e-01 | 75.7% | 97.3% |
| 2xcjA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 51.0 | 5.69e-01 | 87.4% | 79.8% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 52.0 | 5.24e-01 | 71.8% | 66.0% |
| 3u3wA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 52.0 | 6.38e-01 | 73.8% | 100.0% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 56.0 | 6.16e-01 | 71.8% | 96.4% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.79 | 53.0 | 6.36e-01 | 87.4% | 100.0% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.79 | 57.0 | 6.63e-01 | 76.7% | 100.0% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 57.0 | 6.17e-01 | 79.6% | 87.8% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 47.0 | 5.20e-01 | 74.8% | 74.4% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 59.0 | 6.58e-01 | 79.6% | 100.0% |
| 3fymA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 51.0 | 5.77e-01 | 89.3% | 87.8% |
| 2ictA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 51.0 | 5.79e-01 | 81.6% | 88.9% |
| 3b7hA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 53.0 | 6.13e-01 | 82.5% | 100.0% |
| 3pxpA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 56.0 | 5.91e-01 | 78.6% | 100.0% |
| 2ebyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 51.0 | 5.75e-01 | 87.4% | 92.4% |
| 3cecA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 50.0 | 5.32e-01 | 87.4% | 80.2% |
| 6f8hC00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 51.0 | 5.38e-01 | 83.5% | 81.7% |
| 1x57A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 53.0 | 5.68e-01 | 95.1% | 87.9% |
| 3g7dA04 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 47.0 | 4.94e-01 | 95.1% | 79.1% |
| 3mlfE00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 47.0 | 5.12e-01 | 70.9% | 88.4% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.60 | 45.0 | 4.01e-01 | 80.6% | 83.0% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 29.0 | 3.73e-01 | 72.8% | 80.0% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 35.0 | 3.90e-01 | 70.9% | 75.3% |
| 3godB02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.56 | 46.0 | 3.72e-01 | 90.3% | 94.7% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.55 | 35.0 | 3.41e-01 | 94.2% | 56.6% |
| 2l1pA00 | 1.10.260.70 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › SATB, CULT domain | 0.53 | 39.0 | 4.26e-01 | 82.5% | 95.2% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.52 | 34.0 | 3.65e-01 | 94.2% | 76.1% |
| 4fjvA02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.52 | 40.0 | 3.69e-01 | 86.4% | 66.0% |
| 4dhiB02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.52 | 40.0 | 3.67e-01 | 85.4% | 75.2% |
| 2a0bA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.52 | 35.0 | 3.35e-01 | 100.0% | 60.2% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4605318 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.90 | 58.0 | 6.83e-01 | 78.6% | 90.7% |
| 4367316 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.90 | 63.0 | 6.03e-01 | 71.8% | 69.6% |
| 3979332 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 51.0 | 6.71e-01 | 86.4% | 100.0% |
| 5080375 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.87 | 68.0 | 7.25e-01 | 80.6% | 95.6% |
| 3287571 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 62.0 | 6.85e-01 | 73.8% | 89.4% |
| 3969553 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.85 | 58.0 | 6.76e-01 | 72.8% | 94.7% |
| 2775 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.85 | 61.0 | 6.82e-01 | 73.8% | 96.3% |
| 3972208 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.85 | 60.0 | 7.05e-01 | 85.4% | 100.0% |
| 4678741 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.85 | 60.0 | 7.03e-01 | 77.7% | 100.0% |
| 4033847 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 60.0 | 5.98e-01 | 72.8% | 71.4% |
| 1149503 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 57.0 | 6.67e-01 | 80.6% | 94.7% |
| 3944738 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 60.0 | 7.00e-01 | 85.4% | 100.0% |
| 2888862 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.83 | 53.0 | 6.55e-01 | 91.3% | 100.0% |
| 4585952 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.83 | 50.0 | 5.98e-01 | 82.5% | 88.6% |
| 4031703 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.83 | 55.0 | 6.68e-01 | 94.2% | 100.0% |
| 3953562 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 54.0 | 6.59e-01 | 72.8% | 98.6% |
| 5054533 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 51.0 | 6.40e-01 | 70.9% | 100.0% |
| 5015314 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 55.0 | 6.21e-01 | 70.9% | 87.5% |
| 3587838 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 54.0 | 6.63e-01 | 74.8% | 100.0% |
| 2773 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 59.0 | 6.86e-01 | 82.5% | 100.0% |
| 3281537 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 61.0 | 6.66e-01 | 76.7% | 97.6% |
| 3285035 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 67.0 | 7.16e-01 | 85.4% | 97.8% |
| 3977908 | 101.1.4.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 | 0.82 | 58.0 | 6.07e-01 | 73.8% | 80.0% |
| 3965656 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.81 | 50.0 | 5.74e-01 | 85.4% | 81.2% |
| 3285904 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.81 | 62.0 | 6.45e-01 | 79.6% | 90.5% |
| 3588760 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.81 | 55.0 | 5.50e-01 | 90.3% | 68.6% |
| 3972740 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.80 | 50.0 | 6.21e-01 | 73.8% | 100.0% |
| 4075146 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.80 | 53.0 | 4.85e-01 | 85.4% | 53.8% |
| 2791 | 101.1.4.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 | 0.80 | 59.0 | 6.29e-01 | 76.7% | 94.4% |
| 3973014 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.79 | 49.0 | 6.11e-01 | 70.9% | 100.0% |
| 3952098 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.79 | 57.0 | 6.41e-01 | 75.7% | 96.2% |
| 4509221 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.79 | 61.0 | 5.65e-01 | 79.6% | 70.4% |
| 3277653 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.79 | 52.0 | 5.76e-01 | 85.4% | 82.4% |
| 169605 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.79 | 59.0 | 6.50e-01 | 77.7% | 94.1% |
| 4380509 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.78 | 59.0 | 5.94e-01 | 93.2% | 77.1% |
| 3587762 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.78 | 63.0 | 6.78e-01 | 86.4% | 100.0% |
| 410670 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.78 | 56.0 | 6.07e-01 | 73.8% | 100.0% |
| 3288847 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.77 | 55.0 | 6.38e-01 | 96.1% | 100.0% |
| 3278834 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.77 | 51.0 | 6.07e-01 | 93.2% | 98.6% |
| 3965368 | 101.1.4.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 | 0.76 | 57.0 | 6.34e-01 | 82.5% | 100.0% |
| 352428 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.76 | 59.0 | 6.36e-01 | 94.2% | 93.3% |
| 3983992 | 101.1.4.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 | 0.76 | 56.0 | 6.30e-01 | 79.6% | 100.0% |
| 3059487 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.76 | 61.0 | 6.61e-01 | 84.5% | 100.0% |
| 3289357 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.76 | 58.0 | 6.05e-01 | 79.6% | 100.0% |
| 3943901 | 101.1.4.20 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 | 0.75 | 58.0 | 6.30e-01 | 84.5% | 100.0% |
| 4061717 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.75 | 53.0 | 5.30e-01 | 72.8% | 99.0% |
| 166410 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.75 | 53.0 | 6.13e-01 | 82.5% | 100.0% |
| 3985846 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.72 | 59.0 | 6.27e-01 | 85.4% | 97.8% |
| 5015557 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.67 | 48.0 | 5.06e-01 | 74.8% | 92.6% |