Back to structures

ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00088

Bact-Vir

ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00088

Identity

Kingdom:
phage

Quality

90.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 88-352
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00149.34 best Metallophos 22.7 1.70e-04 80.0% 83.5%
D2 medium residues 1-84
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18780.7 best HNH_repeat 26.9 7.10e-06 61.9% 92.6%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fxhA00 1.20.120.600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Crystal structure from the mobile metagenome of halifax harbour sewage outfall 0.58 42.0 3.83e-01 76.2% 75.2%
2cqnA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.57 42.0 4.35e-01 77.4% 87.0%
2vcnA01 1.10.520.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › 0.54 39.0 3.33e-01 76.2% 90.1%
3ofnY00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.54 37.0 3.40e-01 72.6% 90.4%
2f1kC02 1.10.3660.10 Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain 0.50 39.0 3.61e-01 85.7% 82.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5073671 601.7.1.1 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like 0.56 38.0 3.46e-01 71.4% 81.7%
3838924 101.1.1.140 alpha arrays › HTH › HTH › Three-helical HTH › DUF1294 0.51 38.0 3.53e-01 79.8% 100.0%