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ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00207
Bact-VirALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00207
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-133
Domain cluster:
rep: MT152698__QPL12267.1__HrrHc1-230__00046__D192-297
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e88A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.62 | 22.0 | 3.74e-01 | 79.5% | 100.0% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 27.0 | 3.63e-01 | 86.4% | 83.8% |
| 1n7oA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.57 | 27.0 | 3.26e-01 | 97.0% | 68.2% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.56 | 33.0 | 3.42e-01 | 96.2% | 63.1% |
| 6z46V01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.55 | 38.0 | 3.48e-01 | 71.2% | 96.7% |
| 3x3nA04 | 2.40.50.910 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Type VII secretion system EccB, repeat 3 domain | 0.53 | 27.0 | 3.24e-01 | 75.0% | 71.9% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.52 | 24.0 | 3.07e-01 | 93.2% | 76.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1245465 | 391.1.1.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 | 0.67 | 24.0 | 3.87e-01 | 84.8% | 86.0% |
| 3281433 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.59 | 29.0 | 3.57e-01 | 94.7% | 72.9% |
| 4022785 | 3435.1.1.3 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-L | 0.55 | 29.0 | 2.41e-01 | 94.7% | 27.0% |