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ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00245
Bact-VirALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00245
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 42-162
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g29A00 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.55 | 47.0 | 4.30e-01 | 95.0% | 91.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029261 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 45.0 | 4.22e-01 | 81.8% | 98.7% |
| 5084081 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.57 | 49.0 | 4.17e-01 | 91.7% | 79.5% |
| 4426056 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.56 | 44.0 | 4.13e-01 | 86.0% | 81.9% |
| 3546480 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.56 | 35.0 | 4.08e-01 | 70.2% | 93.8% |
| 3489385 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 32.0 | 3.24e-01 | 94.2% | 60.0% |
| 5078205 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.51 | 46.0 | 4.03e-01 | 95.0% | 75.3% |
| 4946921 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.50 | 38.0 | 3.37e-01 | 79.3% | 80.6% |