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ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00320

Bact-Vir

ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00320

Identity

Kingdom:
phage

Quality

80.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-102
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.85 53.0 6.41e-01 99.0% 95.5%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 55.0 6.53e-01 92.9% 100.0%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 46.0 5.41e-01 93.9% 89.6%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 42.0 5.19e-01 100.0% 90.3%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 44.0 4.69e-01 96.0% 67.4%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 47.0 5.36e-01 93.9% 90.0%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 38.0 4.68e-01 87.9% 80.3%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 47.0 5.65e-01 99.0% 98.5%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 44.0 4.95e-01 94.9% 80.0%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 41.0 4.73e-01 98.0% 77.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 45.0 5.41e-01 94.9% 96.9%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 40.0 5.00e-01 98.0% 91.5%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 43.0 5.28e-01 94.9% 98.3%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 43.0 5.27e-01 93.9% 96.7%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 40.0 4.63e-01 98.0% 76.4%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.71 38.0 4.75e-01 93.9% 88.1%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 46.0 5.15e-01 94.9% 84.6%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 44.0 5.33e-01 94.9% 98.4%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 46.0 5.17e-01 96.0% 88.0%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 43.0 5.12e-01 93.9% 95.3%
1ug1A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 44.0 4.56e-01 93.9% 68.5%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 42.0 5.02e-01 94.9% 95.2%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 44.0 4.95e-01 96.0% 86.5%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 40.0 4.88e-01 94.9% 93.5%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 42.0 5.08e-01 99.0% 96.9%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.67 41.0 4.92e-01 96.0% 95.2%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 35.0 4.31e-01 93.9% 87.9%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.64 34.0 4.29e-01 85.9% 89.3%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.64 35.0 4.36e-01 91.9% 92.9%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 36.0 4.07e-01 97.0% 86.3%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 40.0 3.92e-01 75.8% 99.1%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.52 32.0 3.66e-01 97.0% 85.7%
8aidA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 36.0 3.35e-01 72.7% 93.8%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 40.0 4.02e-01 85.9% 93.1%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.90e-01 85.9% 100.0%
2ls0101 2.40.50.670 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Target recognition domain of lytic exoenzyme 0.51 41.0 3.96e-01 88.9% 94.7%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3396897 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.79 49.0 5.95e-01 94.9% 96.8%
4261760 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.79 59.0 6.02e-01 100.0% 81.1%
4605602 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 42.0 5.03e-01 96.0% 80.0%
3776390 4.1.1.91 beta barrels › SH3 › SH3 › SH3 › hSH3 0.77 46.0 4.41e-01 94.9% 52.2%
3564972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 44.0 5.20e-01 100.0% 81.4%
4003181 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.76 46.0 5.74e-01 93.9% 100.0%
3741680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 42.0 5.46e-01 98.0% 98.2%
3999508 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 49.0 5.69e-01 99.0% 92.9%
3900733 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 45.0 5.27e-01 94.9% 85.7%
3231675 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.75 45.0 5.25e-01 96.0% 85.7%
3227565 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 45.0 5.62e-01 93.9% 100.0%
4271974 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.74 42.0 5.07e-01 98.0% 85.9%
3591224 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 39.0 5.19e-01 94.9% 100.0%
3715828 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.74 53.0 5.84e-01 94.9% 92.5%
3507146 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 44.0 4.69e-01 100.0% 68.2%
4982354 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.74 45.0 5.39e-01 99.0% 93.8%
4009391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 48.0 5.29e-01 89.9% 82.5%
3660358 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 42.0 5.25e-01 100.0% 93.3%
3234923 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 46.0 5.60e-01 96.0% 100.0%
3920897 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 43.0 4.93e-01 92.9% 78.7%
3698762 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.72 41.0 4.10e-01 98.0% 53.4%
3623785 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 46.0 5.14e-01 96.0% 84.0%
157818 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 45.0 4.69e-01 96.0% 68.1%
4000858 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 47.0 5.49e-01 98.0% 94.3%
3787441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 45.0 4.77e-01 96.0% 70.0%
3594081 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 55.0 6.00e-01 94.9% 98.8%
3660964 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.72 42.0 4.18e-01 99.0% 56.0%
4138935 4.1.1.241 beta barrels › SH3 › SH3 › SH3 › NifZ 0.71 50.0 5.65e-01 100.0% 96.0%
3597255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 39.0 4.20e-01 96.0% 62.4%
4093354 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 46.0 5.33e-01 94.9% 92.9%
1821014 4.1.1.70 beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.70 44.0 5.34e-01 97.0% 98.4%
4208181 4.1.1.70 beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.70 44.0 5.29e-01 97.0% 96.9%
4185893 4.1.1.394 beta barrels › SH3 › SH3 › SH3 › SlpA 0.70 46.0 5.42e-01 88.9% 100.0%
3583296 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 45.0 5.25e-01 96.0% 92.9%
4019491 601.16.1.7 alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › SH3_9 0.70 47.0 3.65e-01 100.0% 32.7%
5029166 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 49.0 5.54e-01 100.0% 97.3%
3194005 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 44.0 5.02e-01 94.9% 85.3%
3022801 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 43.0 4.60e-01 94.9% 71.3%
3570230 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 45.0 4.69e-01 99.0% 72.2%
4376886 4.1.1.241 beta barrels › SH3 › SH3 › SH3 › NifZ 0.69 50.0 5.44e-01 100.0% 92.5%
3586469 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.69 41.0 4.44e-01 100.0% 69.4%
3701345 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 52.0 5.73e-01 100.0% 98.8%
3710561 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 45.0 5.27e-01 96.0% 100.0%
3503332 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 44.0 5.25e-01 91.9% 100.0%
3171604 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 45.0 5.11e-01 94.9% 89.3%
3991896 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 48.0 4.92e-01 100.0% 75.8%
4027502 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 42.0 4.95e-01 100.0% 95.4%
4052296 4.1.1.241 beta barrels › SH3 › SH3 › SH3 › NifZ 0.66 42.0 5.01e-01 85.9% 96.9%
3707023 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.92e-01 96.0% 79.0%
3530890 2004.1.1.402 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CABIT 0.64 49.0 5.16e-01 100.0% 89.8%
3589730 4.1.1.252 beta barrels › SH3 › SH3 › SH3 › MdcG_N 0.64 44.0 4.82e-01 99.0% 87.5%
4018455 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 45.0 3.15e-01 96.0% 23.9%
3798523 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 47.0 5.11e-01 96.0% 97.5%
4208331 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.60 29.0 3.67e-01 73.7% 76.7%
4501781 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.97e-01 100.0% 88.0%
3576235 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 39.0 4.43e-01 100.0% 90.7%
3767452 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 53.0 5.13e-01 99.0% 90.9%
3670468 4.1.1.332 beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.57 45.0 4.09e-01 100.0% 63.1%
3189510 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 31.0 3.82e-01 91.9% 86.7%
3773104 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 51.0 4.58e-01 100.0% 75.6%
1553937 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.54 28.0 3.42e-01 74.7% 75.8%
4112360 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.53 26.0 3.12e-01 74.7% 69.2%