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ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00336
Bact-VirALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00336
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-90
Domain cluster:
rep: ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00175__D6-74
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 49.0 | 5.60e-01 | 73.3% | 76.8% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.79 | 53.0 | 6.21e-01 | 72.2% | 100.0% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 51.0 | 5.64e-01 | 72.2% | 87.3% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 48.0 | 5.57e-01 | 76.7% | 96.8% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 50.0 | 5.51e-01 | 73.3% | 87.5% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 53.0 | 5.74e-01 | 76.7% | 93.4% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.72 | 49.0 | 4.61e-01 | 77.8% | 57.8% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 50.0 | 4.42e-01 | 72.2% | 67.7% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 51.0 | 4.26e-01 | 75.6% | 46.4% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.69 | 48.0 | 4.55e-01 | 77.8% | 61.5% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 45.0 | 5.30e-01 | 80.0% | 100.0% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 51.0 | 5.56e-01 | 100.0% | 95.9% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 47.0 | 5.14e-01 | 71.1% | 87.8% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 47.0 | 5.18e-01 | 77.8% | 91.7% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.67 | 51.0 | 4.51e-01 | 78.9% | 66.1% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 49.0 | 4.97e-01 | 76.7% | 85.6% |
| 2gfuA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 49.0 | 4.30e-01 | 77.8% | 73.1% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 45.0 | 5.10e-01 | 70.0% | 100.0% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.66 | 42.0 | 4.99e-01 | 73.3% | 98.3% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 48.0 | 4.19e-01 | 77.8% | 55.3% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 4.86e-01 | 77.8% | 85.7% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.63 | 53.0 | 5.07e-01 | 91.1% | 83.7% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 42.0 | 4.71e-01 | 70.0% | 98.5% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 38.0 | 3.63e-01 | 70.0% | 54.7% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 46.0 | 4.70e-01 | 83.3% | 91.1% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 41.0 | 4.71e-01 | 73.3% | 100.0% |
| 2hx0A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.58 | 41.0 | 3.67e-01 | 74.4% | 72.0% |
| 1k5dB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.21e-01 | 73.3% | 56.8% |
| 1b44D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 35.0 | 3.38e-01 | 70.0% | 95.3% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025829 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 52.0 | 6.56e-01 | 71.1% | 98.2% |
| 3855974 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.78 | 54.0 | 5.83e-01 | 73.3% | 85.3% |
| 3484700 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.77 | 53.0 | 5.16e-01 | 71.1% | 66.0% |
| 4300449 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.77 | 50.0 | 5.84e-01 | 71.1% | 92.3% |
| 3559960 | 2006.1.6.66 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 | 0.77 | 53.0 | 5.93e-01 | 73.3% | 91.4% |
| 4629735 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 50.0 | 5.78e-01 | 70.0% | 92.3% |
| 4170983 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 52.0 | 5.63e-01 | 71.1% | 89.3% |
| 5071741 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 47.0 | 5.55e-01 | 75.6% | 93.3% |
| 5075469 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.75 | 51.0 | 5.88e-01 | 73.3% | 95.4% |
| 5073368 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 52.0 | 5.81e-01 | 73.3% | 91.4% |
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 49.0 | 5.84e-01 | 76.7% | 100.0% |
| 4943273 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 51.0 | 5.87e-01 | 75.6% | 96.9% |
| 4241924 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.74 | 48.0 | 4.89e-01 | 70.0% | 66.7% |
| 4132516 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.74 | 51.0 | 5.46e-01 | 75.6% | 81.2% |
| 4971532 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 49.0 | 5.53e-01 | 72.2% | 88.6% |
| 3739064 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 50.0 | 5.68e-01 | 73.3% | 96.9% |
| 5052257 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 48.0 | 5.61e-01 | 82.2% | 100.0% |
| 3764432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 44.0 | 5.01e-01 | 71.1% | 83.1% |
| 3185321 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.73 | 54.0 | 5.91e-01 | 78.9% | 96.0% |
| 3511007 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.72 | 51.0 | 4.60e-01 | 73.3% | 55.8% |
| 3978997 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.72 | 51.0 | 5.06e-01 | 76.7% | 70.5% |
| 3886492 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.72 | 50.0 | 5.41e-01 | 72.2% | 88.0% |
| 3706786 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 46.0 | 5.08e-01 | 76.7% | 80.0% |
| 3942573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 45.0 | 5.48e-01 | 75.6% | 100.0% |
| 3232054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 47.0 | 4.51e-01 | 71.1% | 60.0% |
| 4545520 | 4.7.1.7 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL | 0.71 | 51.0 | 5.27e-01 | 76.7% | 80.0% |
| 3953109 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.70 | 51.0 | 5.03e-01 | 76.7% | 71.6% |
| 3616769 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.70 | 46.0 | 4.52e-01 | 70.0% | 63.2% |
| 4250193 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.70 | 50.0 | 5.02e-01 | 74.4% | 80.0% |
| 3925069 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.70 | 52.0 | 4.45e-01 | 77.8% | 50.7% |
| 3481770 | 4.1.1.220 ↗ | beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor | 0.70 | 49.0 | 5.15e-01 | 76.7% | 81.2% |
| 4960540 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 48.0 | 5.46e-01 | 73.3% | 98.5% |
| 4882265 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.68 | 53.0 | 4.41e-01 | 81.1% | 81.8% |
| 5025498 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.68 | 48.0 | 4.84e-01 | 73.3% | 83.3% |
| 3581336 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 52.0 | 4.89e-01 | 88.9% | 66.4% |
| 3255902 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 47.0 | 5.02e-01 | 100.0% | 81.2% |
| 3218475 | 4.1.1.390 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29855 | 0.68 | 50.0 | 4.53e-01 | 76.7% | 58.3% |
| 2552660 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.68 | 51.0 | 4.53e-01 | 78.9% | 66.1% |
| 165654 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.68 | 51.0 | 5.52e-01 | 86.7% | 98.6% |
| 5010832 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.68 | 49.0 | 5.00e-01 | 76.7% | 87.6% |
| 3404157 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.67 | 52.0 | 4.48e-01 | 81.1% | 92.6% |
| 3487453 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.67 | 52.0 | 4.59e-01 | 81.1% | 92.8% |
| 3283097 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.67 | 49.0 | 4.59e-01 | 77.8% | 62.7% |
| 4936914 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.67 | 47.0 | 4.51e-01 | 75.6% | 62.9% |
| 3188394 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.66 | 48.0 | 4.36e-01 | 75.6% | 75.8% |
| 4964141 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.66 | 48.0 | 4.87e-01 | 76.7% | 84.4% |
| 150293 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.66 | 51.0 | 5.03e-01 | 82.2% | 83.3% |
| 2755606 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.66 | 50.0 | 3.75e-01 | 82.2% | 60.9% |
| 4024274 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.65 | 48.0 | 4.60e-01 | 77.8% | 69.5% |
| 3821287 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.65 | 48.0 | 4.16e-01 | 77.8% | 51.4% |
| 3738626 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.65 | 48.0 | 4.11e-01 | 77.8% | 52.4% |
| 3372822 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 46.0 | 5.04e-01 | 84.4% | 89.3% |
| 4071824 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.65 | 47.0 | 5.09e-01 | 81.1% | 90.7% |
| 3174977 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.65 | 51.0 | 4.99e-01 | 82.2% | 86.3% |
| 3899828 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.65 | 46.0 | 4.91e-01 | 78.9% | 83.7% |
| 4945344 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 57.0 | 3.89e-01 | 100.0% | 44.0% |
| 3443078 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.62 | 55.0 | 4.39e-01 | 96.7% | 66.3% |
| 3487936 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 43.0 | 4.80e-01 | 94.4% | 94.3% |
| 3334322 | 4.25.1.1 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › Auxin_resp | 0.61 | 43.0 | 4.63e-01 | 73.3% | 94.7% |
| 5063379 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.60 | 38.0 | 3.04e-01 | 71.1% | 32.2% |
| 3260945 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 39.0 | 4.46e-01 | 72.2% | 100.0% |
| 4159881 | 220.1.1.197 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 | 0.59 | 41.0 | 4.09e-01 | 72.2% | 89.5% |
| 4022025 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.57 | 52.0 | 4.39e-01 | 100.0% | 73.1% |
| 4025365 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.55 | 37.0 | 3.54e-01 | 70.0% | 71.8% |
| 4034031 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.55 | 36.0 | 4.06e-01 | 72.2% | 95.4% |