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ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00404

Bact-Vir

ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00404

Identity

Kingdom:
phage

Quality

88.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-59
PDB
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2csvA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.71 49.0 4.62e-01 93.2% 59.7%
3vd6C01 3.30.50.10 Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A 0.70 44.0 5.03e-01 79.7% 90.2%
2yvrA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.66 44.0 4.79e-01 84.7% 91.1%
3ddtC00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.66 45.0 4.94e-01 84.7% 95.5%
2djaA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.66 46.0 4.15e-01 93.2% 52.4%
4tn3A01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.64 42.0 4.71e-01 93.2% 100.0%
5daeA00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.63 41.0 4.20e-01 71.2% 70.2%
2bayE00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.61 52.0 5.22e-01 96.6% 96.6%
2hzlA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 36.0 2.88e-01 84.7% 30.7%
2yhoE00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.59 50.0 4.76e-01 100.0% 81.4%
3ihpA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.59 47.0 3.85e-01 91.5% 49.1%
2ldrA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 47.0 4.30e-01 100.0% 70.7%
1ufxA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 39.0 3.34e-01 84.7% 69.9%
5ovnA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.50 30.0 2.67e-01 91.5% 37.2%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3217501 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.76 53.0 5.92e-01 78.0% 100.0%
3577501 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.75 57.0 5.53e-01 86.4% 73.8%
3874356 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.75 54.0 6.04e-01 84.7% 100.0%
3502901 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.75 56.0 6.03e-01 84.7% 98.0%
3500001 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.75 57.0 5.67e-01 93.2% 80.0%
3424317 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.75 54.0 5.96e-01 83.1% 100.0%
3568257 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.74 55.0 5.54e-01 84.7% 78.3%
3806562 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.74 53.0 5.86e-01 91.5% 100.0%
3746408 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.74 53.0 5.91e-01 84.7% 100.0%
3520329 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.74 52.0 5.77e-01 79.7% 97.8%
3229366 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.74 56.0 5.76e-01 93.2% 87.3%
3522312 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.73 56.0 5.76e-01 84.7% 87.3%
3408360 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.73 52.0 5.69e-01 83.1% 97.8%
3522307 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.73 52.0 5.72e-01 84.7% 100.0%
3529691 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.73 52.0 5.77e-01 88.1% 100.0%
3895529 904.1.1.35 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-UBP_var 0.73 52.0 5.78e-01 83.1% 100.0%
3347552 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.73 54.0 5.56e-01 86.4% 85.5%
3911914 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.73 52.0 5.76e-01 81.4% 100.0%
3890045 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.73 51.0 5.68e-01 79.7% 97.8%
3885685 904.1.1.11 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-UBP 0.73 51.0 5.71e-01 81.4% 97.8%
3229436 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.73 57.0 4.48e-01 86.4% 40.8%
4350363 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.72 58.0 5.12e-01 88.1% 74.1%
3357823 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.72 54.0 5.46e-01 86.4% 80.0%
3474551 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.72 57.0 5.71e-01 86.4% 85.0%
3580845 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.72 54.0 5.76e-01 84.7% 98.0%
3487740 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.72 55.0 5.87e-01 83.1% 98.0%
3251812 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.71 54.0 5.73e-01 93.2% 96.0%
4024131 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.71 53.0 5.61e-01 84.7% 94.0%
3591385 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.71 50.0 5.45e-01 81.4% 97.8%
3882035 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.71 53.0 5.18e-01 86.4% 73.8%
3345514 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.71 53.0 5.65e-01 93.2% 96.0%
3880660 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.71 52.0 4.95e-01 84.7% 67.1%
3258154 376.1.1.93 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SIP5_N 0.70 55.0 4.34e-01 86.4% 46.8%
3897441 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.70 53.0 5.14e-01 86.4% 73.8%
3890373 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.70 51.0 5.43e-01 93.2% 94.0%
3905022 376.1.6.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain 0.70 52.0 5.50e-01 84.7% 94.0%
3613485 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.70 51.0 5.39e-01 93.2% 94.0%
3221207 376.1.6.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › zf-B_box 0.70 50.0 5.44e-01 83.1% 100.0%
3619152 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.70 51.0 5.14e-01 86.4% 78.3%
3903314 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.70 53.0 4.46e-01 93.2% 49.0%
3364276 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.70 52.0 5.51e-01 81.4% 96.0%
3717991 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.68 50.0 4.92e-01 88.1% 72.3%
3851083 376.1.6.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain 0.68 49.0 5.23e-01 86.4% 92.0%
3382637 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.68 53.0 4.61e-01 84.7% 64.4%
3361545 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.68 59.0 4.74e-01 100.0% 68.9%
3543371 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.68 52.0 5.49e-01 83.1% 98.0%
3718377 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.67 47.0 3.54e-01 84.7% 29.3%
3619881 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.67 43.0 4.90e-01 71.2% 97.5%
3579480 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.67 50.0 5.26e-01 93.2% 96.0%
3247175 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.67 55.0 4.96e-01 91.5% 82.5%
3312159 904.1.1.27 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box, ANCHR-like_BBOX 0.66 57.0 4.82e-01 100.0% 78.1%
3925077 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.66 50.0 4.29e-01 84.7% 62.0%
8591 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.66 46.0 4.38e-01 93.2% 62.0%
3895783 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.66 48.0 5.07e-01 86.4% 96.0%
3915620 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.65 49.0 5.19e-01 84.7% 98.0%
3567109 904.1.1.3 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › ANCHR-like_BBOX 0.65 50.0 5.03e-01 86.4% 93.3%
3886054 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.65 49.0 5.08e-01 86.4% 90.9%
3776722 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.65 50.0 5.19e-01 86.4% 90.9%
3743721 376.1.1.93 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SIP5_N 0.65 50.0 4.10e-01 86.4% 67.0%
3664680 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.64 56.0 4.83e-01 100.0% 82.1%
3521610 376.1.1.73 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ANCHR-like_BBOX 0.64 47.0 5.03e-01 83.1% 98.0%
3397204 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.64 49.0 4.17e-01 84.7% 60.0%
3997707 376.1.1.75 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Pellino_RING 0.63 54.0 4.91e-01 98.3% 88.7%
4252085 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.62 48.0 5.13e-01 93.2% 100.0%
4011231 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 51.0 4.67e-01 93.2% 75.0%
3593825 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 52.0 4.65e-01 96.6% 83.5%
3493360 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.61 46.0 4.87e-01 93.2% 98.0%
3760308 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.61 47.0 4.87e-01 88.1% 96.4%
3314956 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 45.0 4.81e-01 83.1% 94.0%
3601028 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 49.0 4.94e-01 96.6% 100.0%
3728775 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 49.0 4.42e-01 94.9% 75.3%
3451778 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.59 49.0 3.90e-01 100.0% 53.3%
3770354 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.58 50.0 4.50e-01 100.0% 87.1%
3478408 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.58 47.0 4.35e-01 96.6% 70.0%
3271900 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.58 48.0 4.51e-01 98.3% 80.0%
3306063 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.57 49.0 4.59e-01 100.0% 78.7%
3995147 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.57 48.0 4.32e-01 98.3% 76.5%
5059962 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.56 44.0 4.43e-01 98.3% 93.1%
3495803 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 47.0 2.93e-01 100.0% 32.7%
3713646 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.55 45.0 3.86e-01 100.0% 63.6%
3899147 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.53 41.0 4.01e-01 93.2% 85.7%
3534502 109.4.1.1310 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N 0.50 42.0 2.37e-01 96.6% 10.1%