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ALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00472
Bact-VirALT_09252017_20_scaffold_10_prodigal-single.1__X__X__00472
Identity
- Kingdom:
- phage
Quality
74.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-100
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.66 | 45.0 | 4.20e-01 | 100.0% | 56.5% |
| 3b8bA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.57 | 41.0 | 3.53e-01 | 75.0% | 85.5% |
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 41.0 | 4.05e-01 | 100.0% | 75.5% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 39.0 | 4.28e-01 | 93.0% | 100.0% |
| 3hjeA03 | 1.10.150.200 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 | 0.53 | 43.0 | 4.44e-01 | 88.0% | 96.7% |
| 1ed1A00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.52 | 34.0 | 3.27e-01 | 71.0% | 56.1% |
| 4n81A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.52 | 39.0 | 3.57e-01 | 80.0% | 88.2% |
| 3tc1B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 44.0 | 3.25e-01 | 100.0% | 88.9% |
| 1gs0A01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.51 | 39.0 | 3.59e-01 | 79.0% | 64.3% |
| 5mi7A03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.51 | 39.0 | 2.96e-01 | 83.0% | 56.1% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.51 | 42.0 | 3.03e-01 | 93.0% | 70.7% |
| 1yhlA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 45.0 | 3.10e-01 | 100.0% | 38.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3574560 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 48.0 | 5.07e-01 | 100.0% | 90.0% |
| 3913534 | 101.1.1.267 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF26138 | 0.62 | 44.0 | 3.87e-01 | 100.0% | 48.4% |
| 3445049 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 46.0 | 4.06e-01 | 79.0% | 55.2% |
| 3646698 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.61 | 44.0 | 4.69e-01 | 83.0% | 88.2% |
| 3829959 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 44.0 | 4.61e-01 | 83.0% | 87.8% |
| 4021006 | 627.1.1.0 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain | 0.55 | 45.0 | 3.70e-01 | 90.0% | 50.0% |
| 4015889 | 627.1.1.1 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9 | 0.55 | 45.0 | 3.70e-01 | 90.0% | 50.0% |
| 4559898 | 141.1.1.4 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C | 0.54 | 46.0 | 3.29e-01 | 100.0% | 91.5% |
| 4540132 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.53 | 46.0 | 3.56e-01 | 100.0% | 65.0% |
| 1174175 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.52 | 37.0 | 3.26e-01 | 75.0% | 82.4% |
| 4945001 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 46.0 | 4.61e-01 | 100.0% | 97.0% |