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ALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00023
Bact-VirALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00023
Identity
- Kingdom:
- phage
Quality
63.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-72_361-492_505-519
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zvcA00 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.52 | 33.0 | 3.51e-01 | 96.3% | 70.2% |
| 3klxB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 31.0 | 3.20e-01 | 99.5% | 63.0% |
| 5e4bA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 34.0 | 3.51e-01 | 100.0% | 71.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3266624 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.62 | 30.0 | 3.82e-01 | 96.8% | 77.3% |
| 4951886 | 3174.4.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Hypothetical protein NegoA.19184.a N-terminal domain › Hypothetical protein NegoA.19184.a N-terminal domain | 0.62 | 29.0 | 3.89e-01 | 93.1% | 86.7% |
| 3618387 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.59 | 29.0 | 3.63e-01 | 98.4% | 74.8% |
| 3578619 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.59 | 29.0 | 3.72e-01 | 98.4% | 80.0% |
| 3399943 | 9.1.1.50 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7042 | 0.56 | 33.0 | 3.73e-01 | 97.9% | 76.4% |
| 3264731 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.54 | 30.0 | 3.49e-01 | 93.6% | 75.4% |
| 3643274 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.51 | 34.0 | 3.62e-01 | 99.5% | 77.0% |
| 1888731 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.50 | 33.0 | 3.47e-01 | 100.0% | 71.2% |
D2
high
residues 827-935
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1iwlA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.71 | 40.0 | 3.41e-01 | 82.6% | 34.5% |
| 3wx1A00 | 2.170.150.20 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. | 0.62 | 33.0 | 3.38e-01 | 71.6% | 50.0% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.61 | 41.0 | 3.32e-01 | 74.3% | 36.6% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.59 | 36.0 | 4.09e-01 | 71.6% | 80.5% |
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.59 | 43.0 | 3.91e-01 | 82.6% | 59.4% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.56 | 45.0 | 3.46e-01 | 84.4% | 92.8% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.56 | 41.0 | 3.37e-01 | 82.6% | 44.3% |
| 5exvC00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.54 | 44.0 | 3.85e-01 | 88.1% | 78.8% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 42.0 | 2.87e-01 | 82.6% | 92.9% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 44.0 | 4.05e-01 | 85.3% | 92.8% |
| 1eqnB01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.54 | 41.0 | 3.99e-01 | 83.5% | 90.5% |
| 2au3A02 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.53 | 41.0 | 3.99e-01 | 84.4% | 87.4% |
| 3gmvX00 | 3.10.450.730 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › BLIP domain | 0.53 | 41.0 | 3.69e-01 | 83.5% | 90.4% |
| 1q25A03 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.52 | 37.0 | 3.35e-01 | 75.2% | 53.7% |
| 5w36B01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.52 | 40.0 | 3.80e-01 | 83.5% | 86.6% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 42.0 | 3.24e-01 | 87.2% | 58.7% |
| 3sd2A01 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 33.0 | 3.81e-01 | 95.4% | 93.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4039533 | 3321.1.1.1 ↗ | a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander | 0.65 | 52.0 | 4.54e-01 | 84.4% | 90.0% |
| 3877591 | 77.3.1.5 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN_DRC7 | 0.64 | 49.0 | 3.50e-01 | 80.7% | 30.2% |
| 3990074 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.63 | 50.0 | 5.15e-01 | 84.4% | 92.4% |
| 3598380 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.62 | 55.0 | 4.14e-01 | 95.4% | 96.1% |
| 3495079 | 77.3.1.5 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN_DRC7 | 0.62 | 57.0 | 4.21e-01 | 99.1% | 70.2% |
| 3609368 | 77.1.1.3 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 | 0.62 | 49.0 | 3.88e-01 | 83.5% | 50.5% |
| 3719596 | 77.1.1.3 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 | 0.61 | 55.0 | 4.69e-01 | 96.3% | 97.6% |
| 3261183 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.60 | 37.0 | 3.12e-01 | 73.4% | 38.3% |
| 3393795 | 77.1.1.3 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 | 0.59 | 53.0 | 3.98e-01 | 98.2% | 81.2% |
| 3794338 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 33.0 | 3.77e-01 | 88.1% | 72.9% |
| 4558296 | 77.1.1.3 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 | 0.58 | 52.0 | 3.86e-01 | 98.2% | 81.5% |
| 3538630 | 77.3.1.5 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN_DRC7 | 0.58 | 52.0 | 3.82e-01 | 97.2% | 80.4% |
| 166902 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.56 | 45.0 | 3.46e-01 | 84.4% | 92.8% |
| 3074400 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.56 | 42.0 | 4.39e-01 | 78.9% | 89.9% |
| 3057488 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.56 | 41.0 | 3.31e-01 | 82.6% | 42.1% |
| 3966386 | 3523.1.1.0 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) | 0.56 | 45.0 | 4.11e-01 | 85.3% | 81.4% |
| 2464332 | 3523.1.1.1 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG | 0.55 | 42.0 | 4.44e-01 | 98.2% | 89.6% |
| 3931969 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 37.0 | 3.59e-01 | 70.6% | 60.0% |
| 4588732 | 4023.1.1.1 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N | 0.55 | 42.0 | 3.93e-01 | 81.7% | 87.4% |
| 296086 | 219.1.1.45 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Mac-1 | 0.54 | 44.0 | 3.31e-01 | 89.9% | 98.0% |
| 3948312 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.54 | 42.0 | 4.38e-01 | 85.3% | 89.0% |
| 4467864 | 3523.1.1.0 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) | 0.53 | 43.0 | 3.85e-01 | 85.3% | 74.7% |
| 1407259 | 4023.1.1.1 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N | 0.53 | 41.0 | 4.01e-01 | 84.4% | 88.8% |
| 3387388 | 4023.1.1.1 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N | 0.53 | 41.0 | 3.98e-01 | 84.4% | 90.4% |
| 435 | 2.8.1.1 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C | 0.52 | 34.0 | 3.90e-01 | 72.5% | 91.3% |
| 4005412 | 3523.1.1.3 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptC | 0.52 | 41.0 | 3.73e-01 | 85.3% | 84.0% |
D3
medium
residues 1-31_73-92_114-210_520-549
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2npiA03 | 2.40.30.330 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Pre-mRNA cleavage complex subunit Clp1, C-terminal domain | 0.58 | 34.0 | 4.25e-01 | 92.7% | 96.1% |
| 2nr4A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 27.0 | 3.05e-01 | 94.9% | 57.1% |
| 4rdlA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.56 | 34.0 | 4.22e-01 | 87.6% | 100.0% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 31.0 | 4.00e-01 | 76.4% | 99.0% |
| 5xgbA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 32.0 | 3.80e-01 | 77.0% | 87.3% |
| 4f3lA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 33.0 | 3.93e-01 | 97.2% | 89.3% |
| 3mjqA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 30.0 | 3.79e-01 | 75.3% | 92.5% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.53 | 26.0 | 3.45e-01 | 88.8% | 90.8% |
| 3mfxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 30.0 | 3.66e-01 | 76.4% | 86.0% |
| 1vwxf00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.52 | 32.0 | 3.91e-01 | 87.1% | 97.2% |
| 3ewkA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 32.0 | 3.93e-01 | 74.7% | 99.1% |
| 3lidA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 27.0 | 3.48e-01 | 78.1% | 89.6% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.51 | 27.0 | 3.15e-01 | 87.1% | 68.3% |
| 1d06A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 30.0 | 3.51e-01 | 75.3% | 80.0% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 28.0 | 3.28e-01 | 80.9% | 74.4% |
| 4rlzA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.51 | 31.0 | 3.82e-01 | 87.6% | 98.2% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 24.0 | 3.35e-01 | 75.8% | 95.1% |
| 4ic6C01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 27.0 | 3.32e-01 | 84.8% | 81.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3240679 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 37.0 | 3.95e-01 | 89.9% | 68.8% |
| 4978571 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.56 | 30.0 | 3.25e-01 | 97.2% | 59.3% |
| 4983714 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.55 | 30.0 | 3.82e-01 | 74.2% | 88.6% |
| 4947671 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 27.0 | 3.75e-01 | 83.1% | 100.0% |
| 3275136 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.55 | 31.0 | 4.02e-01 | 76.4% | 99.0% |
| 3204861 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.54 | 32.0 | 3.96e-01 | 86.5% | 94.4% |
| 3205875 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 34.0 | 3.88e-01 | 87.1% | 83.7% |
| 1806542 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.53 | 35.0 | 3.67e-01 | 89.9% | 73.2% |
| 5045728 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.53 | 33.0 | 3.86e-01 | 100.0% | 85.4% |
| 5020715 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.53 | 31.0 | 3.72e-01 | 98.9% | 87.0% |
| 5005721 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.53 | 32.0 | 3.86e-01 | 75.8% | 91.3% |
| 5017897 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.52 | 29.0 | 3.16e-01 | 74.2% | 63.3% |
| 5048405 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.52 | 32.0 | 3.81e-01 | 97.8% | 90.0% |
| 5045469 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 30.0 | 3.58e-01 | 76.4% | 88.7% |
| 4966101 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.50 | 30.0 | 3.64e-01 | 74.2% | 90.4% |
| 5006120 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.50 | 29.0 | 3.42e-01 | 96.1% | 81.7% |
D4
medium
residues 93-113_211-256_283-347
D5
medium
residues 550-602_711-787
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.57 | 44.0 | 4.73e-01 | 94.6% | 95.4% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.56 | 27.0 | 3.33e-01 | 93.8% | 73.1% |
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.55 | 37.0 | 3.92e-01 | 95.4% | 77.2% |
| 4bfeC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 31.0 | 3.35e-01 | 94.6% | 65.1% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.53 | 40.0 | 4.37e-01 | 94.6% | 97.2% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 31.0 | 3.37e-01 | 84.6% | 69.2% |
| 2c4iA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.52 | 43.0 | 4.48e-01 | 93.1% | 96.6% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 32.0 | 3.24e-01 | 100.0% | 61.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4930890 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 29.0 | 3.73e-01 | 92.3% | 68.0% |
| 2979129 | 919.1.1.1 ↗ | few secondary structure elements › Ribosomal protein L36 › Ribosomal protein L36 › Ribosomal protein L36 › Ribosomal_L36 | 0.65 | 20.0 | 3.34e-01 | 93.8% | 76.1% |
| 3231925 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 36.0 | 4.04e-01 | 93.1% | 76.0% |
| 3775836 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.60 | 39.0 | 4.16e-01 | 92.3% | 76.4% |
| 4938115 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.58 | 31.0 | 3.90e-01 | 93.8% | 89.2% |
| 3861569 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.55 | 36.0 | 3.86e-01 | 93.8% | 75.7% |
| 3224512 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 33.0 | 3.65e-01 | 93.1% | 74.8% |
| 4793345 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.55 | 42.0 | 4.53e-01 | 94.6% | 97.2% |
| 857 | 9.3.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Qn_am_d_aII | 0.54 | 40.0 | 4.32e-01 | 93.8% | 93.5% |
| 2879003 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 35.0 | 3.84e-01 | 94.6% | 80.6% |
| 3679362 | 4.1.1.351 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 | 0.51 | 33.0 | 3.87e-01 | 91.5% | 96.5% |