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ALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00109

Bact-Vir

ALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00109

Identity

Kingdom:
phage

Quality

94.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-130
PDB
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 73.0 5.77e-01 100.0% 46.7%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.84 63.0 5.06e-01 99.2% 43.4%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 70.0 5.57e-01 100.0% 46.7%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 72.0 5.67e-01 100.0% 48.2%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 69.0 7.16e-01 100.0% 94.1%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 69.0 7.21e-01 99.2% 95.0%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 72.0 7.40e-01 100.0% 97.6%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 66.0 5.66e-01 98.4% 57.0%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 67.0 5.40e-01 98.4% 47.9%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 70.0 7.02e-01 98.4% 91.5%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 70.0 5.46e-01 99.2% 47.1%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 68.0 5.39e-01 100.0% 47.8%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 67.0 6.93e-01 97.7% 95.0%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 69.0 5.45e-01 100.0% 48.2%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 68.0 5.36e-01 99.2% 46.5%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 66.0 5.93e-01 100.0% 67.4%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 65.0 5.22e-01 99.2% 47.9%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 67.0 6.84e-01 99.2% 94.4%
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 64.0 6.58e-01 100.0% 92.6%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 65.0 6.53e-01 100.0% 89.8%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.76 71.0 5.44e-01 99.2% 49.8%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 63.0 6.51e-01 100.0% 93.5%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.75 62.0 6.60e-01 100.0% 100.0%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.75 66.0 5.21e-01 99.2% 47.9%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.74 61.0 6.53e-01 100.0% 100.0%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.74 60.0 4.95e-01 95.3% 49.8%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.74 61.0 6.32e-01 100.0% 94.2%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.74 61.0 6.25e-01 100.0% 91.1%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.73 63.0 6.42e-01 98.4% 93.8%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.72 64.0 6.42e-01 100.0% 94.7%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.70 63.0 5.68e-01 97.7% 74.3%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.68 61.0 4.69e-01 99.2% 47.7%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.68 62.0 6.06e-01 100.0% 90.1%
1ekzA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 26.0 3.28e-01 83.7% 76.3%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 25.0 3.15e-01 96.1% 77.9%
2zplB00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 30.0 3.42e-01 73.6% 76.6%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3387590 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.88 70.0 7.46e-01 100.0% 92.2%
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 74.0 7.67e-01 100.0% 95.0%
5059299 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 73.0 7.59e-01 100.0% 95.0%
1871497 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.86 70.0 7.27e-01 98.4% 91.6%
4980359 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 72.0 7.50e-01 100.0% 95.0%
4599875 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 71.0 7.41e-01 100.0% 94.2%
4983063 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 74.0 7.54e-01 100.0% 94.4%
4059128 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 71.0 7.39e-01 100.0% 95.0%
4936049 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 71.0 7.35e-01 100.0% 95.0%
5990 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 70.0 7.24e-01 100.0% 93.4%
5037344 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 72.0 7.49e-01 100.0% 98.3%
4178829 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 70.0 7.17e-01 100.0% 92.0%
4941928 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 71.0 7.36e-01 100.0% 96.7%
5070586 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 72.0 7.33e-01 100.0% 94.4%
5056757 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 71.0 7.22e-01 100.0% 92.8%
5039026 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 68.0 7.02e-01 100.0% 91.7%
5027066 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 71.0 7.28e-01 100.0% 93.6%
4943404 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 72.0 7.25e-01 100.0% 93.1%
4302174 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 69.0 7.07e-01 100.0% 92.8%
3787933 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.81 76.0 7.03e-01 99.2% 91.9%
4870150 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 72.0 7.11e-01 100.0% 90.3%
4142781 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 68.0 6.98e-01 99.2% 92.8%
3251868 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.80 76.0 7.37e-01 99.2% 92.9%
162047 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 69.0 6.97e-01 100.0% 92.1%
136536 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 69.0 7.06e-01 100.0% 95.1%
4937819 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 71.0 7.21e-01 100.0% 96.0%
4057537 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 68.0 6.96e-01 100.0% 92.8%
4987602 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 69.0 7.03e-01 100.0% 94.4%
5043506 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 68.0 6.94e-01 100.0% 92.8%
5044014 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 66.0 7.01e-01 97.7% 98.3%
2392830 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 70.0 6.96e-01 100.0% 90.8%
5078494 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 68.0 6.90e-01 99.2% 92.8%
5047575 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 68.0 6.98e-01 100.0% 94.4%
4995027 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 67.0 6.82e-01 100.0% 92.0%
1822927 227.1.1.2 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 70.0 6.43e-01 100.0% 74.2%
143269 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 68.0 6.90e-01 100.0% 93.6%
4934001 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 70.0 7.12e-01 100.0% 96.8%
4998584 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 72.0 7.09e-01 100.0% 92.6%
5011281 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 67.0 6.86e-01 100.0% 92.8%
4096140 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 68.0 6.97e-01 100.0% 95.2%
4948360 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 66.0 6.67e-01 96.9% 88.4%
2442100 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 69.0 6.84e-01 100.0% 89.0%
4992059 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 68.0 6.94e-01 100.0% 95.1%
4976500 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 68.0 6.85e-01 100.0% 92.2%
3602548 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 66.0 6.77e-01 99.2% 92.8%
4943405 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 67.0 6.86e-01 97.7% 93.6%
4372908 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.78 63.0 6.46e-01 98.4% 88.0%
4941929 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 67.0 6.82e-01 100.0% 92.2%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.78 74.0 7.16e-01 100.0% 95.0%
5052550 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.77 68.0 6.95e-01 100.0% 96.8%
5037314 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 64.0 6.68e-01 96.1% 94.2%
5033948 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 66.0 6.66e-01 100.0% 90.0%
4998585 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 64.0 6.61e-01 99.2% 94.2%
309454 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 66.0 6.54e-01 99.2% 87.9%
4934002 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 67.0 6.72e-01 100.0% 91.5%
5027067 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 65.0 6.79e-01 96.1% 96.7%
3722114 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.77 71.0 6.69e-01 99.2% 93.5%
3397928 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.77 69.0 7.01e-01 99.2% 98.4%
4038410 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.77 71.0 6.92e-01 99.2% 95.7%
5029787 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 63.0 6.52e-01 99.2% 94.2%
4212381 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 67.0 6.66e-01 99.2% 88.9%
4956740 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 66.0 6.73e-01 99.2% 94.4%
4991675 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 65.0 6.67e-01 100.0% 93.6%
5043507 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 64.0 6.65e-01 96.9% 95.8%
5028024 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 66.0 6.65e-01 100.0% 91.5%
5023031 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 65.0 6.64e-01 100.0% 94.4%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.76 64.0 6.67e-01 100.0% 96.7%
5060716 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.76 68.0 6.81e-01 99.2% 93.8%
3597091 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.76 65.0 6.64e-01 100.0% 94.4%
3785352 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.76 70.0 6.41e-01 99.2% 90.3%
5037345 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 67.0 6.63e-01 100.0% 91.7%
3480669 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.76 71.0 6.82e-01 99.2% 93.0%
3798354 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.76 69.0 6.83e-01 99.2% 94.1%
3351110 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 64.0 6.68e-01 96.1% 97.5%
2588759 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 63.0 6.54e-01 100.0% 95.0%
3478161 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.75 69.0 6.88e-01 99.2% 94.8%
4929645 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.75 66.0 6.78e-01 99.2% 96.8%
4172290 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.75 65.0 6.54e-01 100.0% 92.3%
3623607 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.75 70.0 6.80e-01 100.0% 92.1%
4026073 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.75 68.0 6.91e-01 97.7% 99.2%
4608521 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.75 69.0 5.92e-01 99.2% 76.5%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.75 65.0 6.65e-01 99.2% 96.8%
5000467 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.75 70.0 6.89e-01 100.0% 96.3%
5991 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.75 63.0 6.52e-01 99.2% 95.1%
143267 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.75 65.0 6.55e-01 99.2% 93.7%
4517015 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.75 63.0 6.41e-01 100.0% 93.5%
167574 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.75 62.0 6.23e-01 100.0% 87.8%
3939755 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.74 68.0 6.46e-01 99.2% 85.8%
3534499 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.74 68.0 6.59e-01 99.2% 95.2%
3804177 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.74 68.0 6.60e-01 100.0% 97.2%
4043935 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.74 66.0 6.61e-01 100.0% 95.4%
138072 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.73 64.0 6.42e-01 100.0% 92.4%
1290662 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.73 64.0 6.19e-01 97.7% 84.6%
5074320 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.73 63.0 6.37e-01 99.2% 93.1%
4232371 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.73 61.0 6.32e-01 100.0% 96.7%
3292092 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.72 67.0 6.66e-01 100.0% 98.5%
4026069 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.71 63.0 6.21e-01 96.9% 89.6%
3932751 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.71 60.0 6.05e-01 98.4% 90.8%
4030418 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.70 64.0 6.22e-01 96.9% 93.6%
3702817 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.70 63.0 6.28e-01 100.0% 94.0%
D2 high residues 145-251
PDB
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 79.0 5.75e-01 100.0% 47.3%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 79.0 5.90e-01 100.0% 49.6%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.83 78.0 7.47e-01 100.0% 96.7%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 78.0 5.81e-01 100.0% 46.5%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 78.0 5.75e-01 100.0% 47.4%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 77.0 5.75e-01 99.1% 47.9%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 77.0 6.12e-01 100.0% 58.8%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 77.0 6.39e-01 100.0% 96.6%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 77.0 7.19e-01 100.0% 95.3%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 74.0 7.14e-01 96.3% 90.8%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 77.0 5.64e-01 100.0% 49.0%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 76.0 7.31e-01 100.0% 95.8%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 76.0 5.62e-01 100.0% 47.8%
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.81 73.0 7.00e-01 96.3% 88.5%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 73.0 5.62e-01 96.3% 49.8%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 75.0 6.06e-01 100.0% 58.0%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 75.0 5.62e-01 100.0% 47.8%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 75.0 5.64e-01 100.0% 49.2%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 74.0 5.24e-01 100.0% 47.0%
1jqlA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.80 74.0 7.14e-01 100.0% 95.8%
1dmlA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 73.0 5.37e-01 100.0% 44.9%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 72.0 6.82e-01 97.2% 87.9%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 73.0 6.91e-01 100.0% 95.2%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 72.0 5.21e-01 100.0% 49.5%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 73.0 6.87e-01 100.0% 89.1%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 73.0 7.02e-01 100.0% 95.0%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 73.0 6.76e-01 100.0% 90.8%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 72.0 5.26e-01 100.0% 43.5%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 71.0 6.62e-01 100.0% 92.3%
2yyzA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 35.0 4.43e-01 97.2% 100.0%
2h1qA01 3.30.390.100 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.52 35.0 3.38e-01 71.0% 57.8%
5dcaA08 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.50 30.0 2.97e-01 79.4% 54.5%
1dzuP00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.50 35.0 2.93e-01 74.8% 67.0%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3738030 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 80.0 7.31e-01 100.0% 93.3%
4939066 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.85 80.0 7.44e-01 100.0% 93.0%
3624708 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 80.0 7.30e-01 100.0% 90.4%
3997015 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 80.0 7.40e-01 100.0% 93.8%
5037345 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.84 79.0 7.31e-01 100.0% 92.5%
3839477 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.84 79.0 7.41e-01 99.1% 92.8%
3397928 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.84 76.0 7.17e-01 95.3% 95.2%
3804177 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.84 76.0 6.76e-01 95.3% 94.5%
5027067 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.84 78.0 7.49e-01 99.1% 99.2%
4456195 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 78.0 7.52e-01 99.1% 96.7%
4995028 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.83 76.0 7.20e-01 97.2% 95.2%
3932751 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 79.0 7.31e-01 100.0% 96.2%
5010672 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 77.0 7.41e-01 98.1% 96.7%
3478161 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.83 75.0 6.84e-01 95.3% 92.6%
143428 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.83 78.0 7.50e-01 100.0% 95.0%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.83 75.0 7.05e-01 95.3% 94.4%
4038410 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.82 74.0 6.68e-01 95.3% 92.9%
2834340 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 77.0 6.98e-01 100.0% 91.4%
5028024 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 77.0 7.19e-01 100.0% 90.8%
4517015 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 77.0 7.30e-01 100.0% 95.2%
4660283 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 77.0 7.29e-01 100.0% 96.0%
4991675 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 77.0 7.29e-01 100.0% 95.2%
4976500 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 77.0 7.22e-01 100.0% 92.2%
4608521 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.82 75.0 5.96e-01 97.2% 75.5%
3251045 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 77.0 6.68e-01 100.0% 79.2%
3574882 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.82 77.0 6.97e-01 100.0% 90.6%
5052551 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 77.0 7.24e-01 100.0% 94.4%
3722114 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.82 75.0 6.54e-01 98.1% 92.9%
3478160 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.82 77.0 7.18e-01 100.0% 96.1%
3798355 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.82 77.0 6.92e-01 100.0% 89.3%
4500973 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.82 76.0 7.27e-01 100.0% 94.3%
4542774 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.82 76.0 7.32e-01 100.0% 96.7%
4026069 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 76.0 7.00e-01 100.0% 91.9%
4437554 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.81 76.0 7.18e-01 100.0% 93.6%
3534499 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 74.0 6.57e-01 96.3% 93.1%
4943405 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 7.21e-01 100.0% 96.0%
4055466 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 7.23e-01 100.0% 96.0%
4057937 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 76.0 6.99e-01 100.0% 91.0%
3256903 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 76.0 6.95e-01 100.0% 91.9%
3785352 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.81 74.0 6.32e-01 98.1% 89.1%
2325189 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.81 75.0 6.85e-01 100.0% 91.2%
3406311 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.81 74.0 6.41e-01 97.2% 89.0%
5011281 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 7.15e-01 100.0% 93.6%
143267 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 73.0 6.87e-01 96.3% 91.3%
5991 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 76.0 7.22e-01 100.0% 95.1%
2805173 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 75.0 7.11e-01 100.0% 93.6%
2492036 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.80 75.0 6.98e-01 100.0% 89.9%
426904 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.80 75.0 7.13e-01 100.0% 91.9%
4650306 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.80 72.0 6.91e-01 95.3% 90.8%
1871494 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.80 72.0 6.89e-01 95.3% 89.3%
3480669 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.80 73.0 6.52e-01 97.2% 91.6%
2987540 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.80 73.0 6.80e-01 97.2% 83.8%
3788095 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.80 72.0 6.65e-01 97.2% 90.4%
149160 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.80 74.0 6.71e-01 100.0% 92.9%
4027851 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 71.0 6.42e-01 97.2% 92.4%
4943404 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 73.0 6.76e-01 97.2% 90.8%
1082804 227.1.1.13 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_DNAp_acc 0.80 74.0 6.58e-01 100.0% 95.9%
2878147 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.80 74.0 6.76e-01 100.0% 86.9%
4876750 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.80 74.0 7.00e-01 100.0% 91.2%
4934001 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 73.0 6.89e-01 98.1% 95.2%
4633559 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.79 74.0 6.91e-01 100.0% 93.0%
4047098 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.79 71.0 6.82e-01 95.3% 92.5%
3244230 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.79 72.0 6.33e-01 97.2% 90.0%
2392242 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.79 72.0 7.08e-01 98.1% 91.2%
3387600 227.1.1.3 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.79 71.0 6.80e-01 95.3% 90.0%
4591776 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.79 74.0 6.85e-01 100.0% 89.2%
4379629 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.79 73.0 7.02e-01 100.0% 93.3%
3597091 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.79 71.0 6.77e-01 96.3% 91.9%
3743107 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.79 71.0 6.44e-01 97.2% 91.4%
4336156 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.79 73.0 7.01e-01 100.0% 97.5%
3193266 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.79 71.0 6.34e-01 97.2% 91.0%
5978 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.78 73.0 6.98e-01 100.0% 92.7%
2096126 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.78 73.0 6.95e-01 100.0% 92.6%
3022412 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.78 71.0 6.44e-01 98.1% 88.7%
4460660 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.78 73.0 6.68e-01 100.0% 90.4%
3251868 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.78 70.0 6.35e-01 97.2% 91.4%
3787933 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.78 70.0 6.04e-01 97.2% 90.6%
3507498 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.77 69.0 6.10e-01 97.2% 89.3%
3599554 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.76 68.0 6.07e-01 97.2% 90.7%
3387590 227.1.1.8 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.76 70.0 6.90e-01 100.0% 93.0%
3388280 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.73 67.0 6.48e-01 100.0% 91.7%
4995744 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.69 62.0 5.98e-01 100.0% 91.1%
4891104 227.1.1.5 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_UL42 0.65 58.0 5.44e-01 100.0% 96.2%
4241499 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.53 43.0 4.37e-01 85.0% 93.2%
3584987 4072.1.1.1 a+b complex topology › BTG domain-like › BTG domain-like › BTG domain-like › BTG 0.52 43.0 4.03e-01 89.7% 76.1%