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ALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00129
Bact-VirALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00129
Identity
- Kingdom:
- phage
Quality
87.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-72
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ma5A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 57.0 | 5.21e-01 | 98.5% | 66.7% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.69 | 56.0 | 4.66e-01 | 91.2% | 52.9% |
| 1z19A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.67 | 51.0 | 4.46e-01 | 82.4% | 55.0% |
| 2pqrA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 50.0 | 4.60e-01 | 94.1% | 60.2% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.67 | 51.0 | 5.38e-01 | 92.6% | 100.0% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 59.0 | 5.70e-01 | 98.5% | 89.3% |
| 4me2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 57.0 | 4.05e-01 | 94.1% | 55.7% |
| 2odvA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 56.0 | 4.87e-01 | 100.0% | 92.0% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 44.0 | 4.28e-01 | 70.6% | 64.4% |
| 3n4eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.65 | 48.0 | 4.26e-01 | 80.9% | 92.3% |
| 6z0fA02 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.64 | 51.0 | 3.89e-01 | 95.6% | 36.1% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.63 | 53.0 | 4.93e-01 | 97.1% | 96.6% |
| 6wk3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 55.0 | 4.38e-01 | 100.0% | 80.7% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 53.0 | 4.75e-01 | 100.0% | 95.1% |
| 4g80T00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.63 | 53.0 | 4.35e-01 | 100.0% | 64.7% |
| 3qwwA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 52.0 | 3.86e-01 | 97.1% | 34.0% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.62 | 53.0 | 4.30e-01 | 98.5% | 95.7% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.61 | 53.0 | 4.38e-01 | 100.0% | 58.6% |
| 3mekA04 | 1.25.40.970 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 51.0 | 4.87e-01 | 100.0% | 80.0% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.59 | 50.0 | 4.92e-01 | 100.0% | 96.0% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 40.0 | 3.27e-01 | 72.1% | 72.2% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.58 | 50.0 | 4.13e-01 | 100.0% | 54.6% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.58 | 49.0 | 3.99e-01 | 100.0% | 90.1% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.53 | 37.0 | 3.37e-01 | 72.1% | 92.2% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4468502 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.79 | 59.0 | 6.21e-01 | 79.4% | 93.3% |
| 4945270 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 63.0 | 4.94e-01 | 97.1% | 44.3% |
| 3662101 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.74 | 63.0 | 6.14e-01 | 97.1% | 90.7% |
| 3496740 | 109.7.1.15 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › TPR_ELP1 | 0.72 | 48.0 | 4.38e-01 | 98.5% | 52.2% |
| 169903 | 109.4.1.1691 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_17, TPR_19 | 0.72 | 57.0 | 5.15e-01 | 94.1% | 63.7% |
| 3967744 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.71 | 58.0 | 4.82e-01 | 89.7% | 52.5% |
| 3733744 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.70 | 58.0 | 4.69e-01 | 91.2% | 49.2% |
| 3189274 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.70 | 58.0 | 4.58e-01 | 92.6% | 44.1% |
| 4099504 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.70 | 56.0 | 5.90e-01 | 100.0% | 100.0% |
| 3359098 | 109.4.1.244 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RPN6_N | 0.69 | 58.0 | 4.34e-01 | 98.5% | 36.6% |
| 4027211 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 61.0 | 3.72e-01 | 98.5% | 53.5% |
| 4050574 | 192.17.1.11 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › UVR | 0.68 | 55.0 | 5.39e-01 | 100.0% | 80.0% |
| 3448742 | 109.7.1.4 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › SNAP | 0.68 | 61.0 | 6.10e-01 | 98.5% | 95.7% |
| 4028661 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.66 | 47.0 | 4.10e-01 | 77.9% | 58.2% |
| 3579643 | 109.7.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › TRAPPC9-Trs120 | 0.66 | 58.0 | 4.90e-01 | 100.0% | 78.3% |
| 3615720 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 4.13e-01 | 98.5% | 35.8% |
| 3193736 | 605.1.1.349 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PF28334 | 0.63 | 54.0 | 4.95e-01 | 97.1% | 73.3% |
| 5017961 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.62 | 50.0 | 4.23e-01 | 91.2% | 52.9% |
| 5027258 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.62 | 49.0 | 4.15e-01 | 89.7% | 52.5% |
| 4169956 | 604.12.1.26 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › HemX | 0.62 | 52.0 | 5.12e-01 | 95.6% | 86.7% |
| 3583519 | 109.59.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain | 0.61 | 49.0 | 4.66e-01 | 86.8% | 85.0% |
| 4084484 | 6155.1.1.17 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › LAB_N | 0.59 | 51.0 | 5.03e-01 | 100.0% | 98.7% |
| 4592728 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.58 | 45.0 | 4.12e-01 | 83.8% | 78.9% |