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ALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00213
Bact-VirALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00213
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-77
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ivwA01 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 42.0 | 4.06e-01 | 92.9% | 50.0% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 42.0 | 4.08e-01 | 92.9% | 63.2% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 38.0 | 4.07e-01 | 94.3% | 71.2% |
| 2k3dA00 | 3.10.450.130 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › folded 79 residue fragment of lin0334 like domains | 0.61 | 43.0 | 4.10e-01 | 100.0% | 60.9% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 38.0 | 4.23e-01 | 91.4% | 86.0% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 38.0 | 3.90e-01 | 94.3% | 66.7% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.60 | 39.0 | 3.43e-01 | 87.1% | 44.7% |
| 2cmgA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.58 | 40.0 | 4.49e-01 | 100.0% | 96.1% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 45.0 | 4.41e-01 | 100.0% | 77.6% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.58 | 39.0 | 4.24e-01 | 100.0% | 87.5% |
| 5fpwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 44.0 | 2.95e-01 | 87.1% | 82.5% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 40.0 | 3.29e-01 | 78.6% | 61.2% |
| 2o07A01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.55 | 39.0 | 4.14e-01 | 100.0% | 88.1% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.54 | 47.0 | 3.40e-01 | 100.0% | 82.4% |
| 5hl8C00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.54 | 36.0 | 3.52e-01 | 70.0% | 81.0% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.53 | 47.0 | 3.38e-01 | 100.0% | 79.5% |
| 6w0pB01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.53 | 38.0 | 2.65e-01 | 80.0% | 49.8% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 43.0 | 3.50e-01 | 100.0% | 46.8% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 34.0 | 3.61e-01 | 94.3% | 79.7% |
| 2byoA00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.52 | 44.0 | 3.37e-01 | 100.0% | 83.6% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 36.0 | 3.00e-01 | 77.1% | 48.3% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 46.0 | 3.17e-01 | 100.0% | 68.1% |
| 1lb6A00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.51 | 40.0 | 3.08e-01 | 84.3% | 69.0% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 44.0 | 3.89e-01 | 100.0% | 83.5% |
| 4nzrM02 | 2.160.20.180 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.51 | 40.0 | 3.05e-01 | 90.0% | 66.3% |
| 3g8yA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 2.59e-01 | 90.0% | 25.1% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 42.0 | 4.28e-01 | 100.0% | 98.5% |
| 2mc2A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 42.0 | 3.15e-01 | 100.0% | 80.1% |
| 3vskA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.50 | 40.0 | 3.34e-01 | 91.4% | 93.2% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3949064 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.69 | 39.0 | 4.08e-01 | 75.7% | 60.0% |
| 4927803 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 41.0 | 4.69e-01 | 94.3% | 84.0% |
| 3251559 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 40.0 | 4.59e-01 | 92.9% | 84.0% |
| 3622139 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 39.0 | 3.57e-01 | 92.9% | 46.7% |
| 5055172 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.59 | 40.0 | 4.40e-01 | 100.0% | 89.1% |
| 4963445 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.59 | 42.0 | 4.02e-01 | 77.1% | 68.2% |
| 3814068 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.58 | 42.0 | 3.31e-01 | 78.6% | 57.1% |
| 4189396 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.58 | 43.0 | 3.31e-01 | 80.0% | 69.4% |
| 3355569 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.57 | 41.0 | 3.30e-01 | 77.1% | 57.9% |
| 3654591 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.57 | 41.0 | 3.25e-01 | 77.1% | 55.3% |
| 4347469 | 2.3.1.1 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › TIMP | 0.57 | 47.0 | 3.97e-01 | 91.4% | 58.3% |
| 3249979 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.57 | 42.0 | 3.36e-01 | 78.6% | 60.7% |
| 3496428 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.56 | 42.0 | 3.38e-01 | 78.6% | 56.3% |
| 3368814 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.56 | 41.0 | 3.31e-01 | 78.6% | 60.0% |
| 3669025 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 42.0 | 2.82e-01 | 94.3% | 20.4% |
| 4225693 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.55 | 45.0 | 3.81e-01 | 91.4% | 58.3% |
| 3811567 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.55 | 39.0 | 3.08e-01 | 77.1% | 71.0% |
| 3820662 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.54 | 40.0 | 3.09e-01 | 78.6% | 69.4% |
| 3836641 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.54 | 40.0 | 3.18e-01 | 78.6% | 63.4% |
| 5052022 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.54 | 42.0 | 3.30e-01 | 87.1% | 79.7% |
| 3260440 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.54 | 48.0 | 2.98e-01 | 100.0% | 32.0% |
| 3289052 | 304.156.1.5 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › PF31086 | 0.54 | 41.0 | 3.84e-01 | 85.7% | 88.9% |
| 4419937 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.54 | 34.0 | 3.25e-01 | 95.7% | 52.9% |
| 4334982 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.54 | 47.0 | 2.94e-01 | 100.0% | 31.7% |
| 3407980 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.54 | 46.0 | 2.89e-01 | 98.6% | 31.6% |
| 3216518 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.53 | 46.0 | 2.90e-01 | 100.0% | 35.2% |
| 4094198 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.53 | 46.0 | 2.88e-01 | 100.0% | 31.3% |
| 4168853 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.53 | 46.0 | 2.90e-01 | 100.0% | 31.3% |
| 3934758 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.53 | 46.0 | 2.83e-01 | 98.6% | 31.4% |
| 3233642 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.53 | 45.0 | 2.86e-01 | 100.0% | 34.4% |
| 3582933 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.53 | 46.0 | 2.90e-01 | 100.0% | 34.2% |
| 4677382 | 5.1.5.75 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 | 0.53 | 42.0 | 2.57e-01 | 87.1% | 21.4% |
| 3396363 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.52 | 45.0 | 2.83e-01 | 100.0% | 32.0% |
| 4990012 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.52 | 46.0 | 3.03e-01 | 95.7% | 40.0% |
| 3389090 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.52 | 45.0 | 2.86e-01 | 100.0% | 33.5% |
| 2361 | 71.1.1.6 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LppX_LprAFG | 0.52 | 44.0 | 3.37e-01 | 100.0% | 83.6% |
| 4372560 | 71.1.1.6 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LppX_LprAFG | 0.52 | 45.0 | 3.27e-01 | 100.0% | 82.4% |
| 3578603 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 35.0 | 3.41e-01 | 88.6% | 62.5% |
| 3834568 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.51 | 37.0 | 3.04e-01 | 77.1% | 81.5% |
| 3247883 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.51 | 43.0 | 3.52e-01 | 100.0% | 77.9% |
| 4314497 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.51 | 43.0 | 2.72e-01 | 100.0% | 33.2% |
| 5006284 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.77e-01 | 88.6% | 76.0% |
| 4523548 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.51 | 44.0 | 4.14e-01 | 100.0% | 80.0% |
| 2774101 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.50 | 42.0 | 2.97e-01 | 100.0% | 83.1% |
| 3904562 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.50 | 38.0 | 3.63e-01 | 94.3% | 70.0% |
| 3833142 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.50 | 36.0 | 3.06e-01 | 77.1% | 82.4% |
D2
high
residues 88-146
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.77 | 50.0 | 3.55e-01 | 71.2% | 23.9% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.74 | 51.0 | 3.97e-01 | 71.2% | 34.1% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.73 | 58.0 | 5.46e-01 | 100.0% | 73.2% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.72 | 54.0 | 4.34e-01 | 93.2% | 42.1% |
| 3fh1A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 46.0 | 3.65e-01 | 71.2% | 32.0% |
| 6d92A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.69 | 58.0 | 3.87e-01 | 94.9% | 28.3% |
| 2z13A00 | 2.30.29.170 | Mainly Beta › Roll › PH-domain like › | 0.68 | 47.0 | 3.75e-01 | 71.2% | 36.8% |
| 3dmcA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 46.0 | 3.55e-01 | 71.2% | 31.3% |
| 3kd9A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 47.0 | 3.06e-01 | 71.2% | 16.9% |
| 6pfzD02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 47.0 | 3.05e-01 | 71.2% | 16.3% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.68 | 60.0 | 4.19e-01 | 100.0% | 34.6% |
| 1b7eA01 | 3.90.350.10 | Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 | 0.68 | 57.0 | 3.80e-01 | 96.6% | 28.0% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 43.0 | 3.39e-01 | 71.2% | 30.5% |
| 2jq5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 46.0 | 3.63e-01 | 74.6% | 34.4% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.66 | 43.0 | 3.84e-01 | 71.2% | 46.0% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.66 | 54.0 | 5.18e-01 | 100.0% | 80.3% |
| 1tuhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 44.0 | 3.49e-01 | 71.2% | 32.1% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.65 | 47.0 | 4.29e-01 | 93.2% | 57.5% |
| 2gdqA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.65 | 56.0 | 4.67e-01 | 100.0% | 96.3% |
| 1vw4502 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 51.0 | 4.50e-01 | 100.0% | 57.6% |
| 2l6mA00 | 3.30.160.400 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 54.0 | 4.67e-01 | 100.0% | 63.4% |
| 5oj2B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 55.0 | 4.70e-01 | 98.3% | 86.5% |
| 5eoxB03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 55.0 | 4.32e-01 | 100.0% | 71.9% |
| 3g8zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 43.0 | 3.42e-01 | 71.2% | 32.8% |
| 3ga2A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.63 | 46.0 | 3.16e-01 | 81.4% | 30.5% |
| 2h3gX01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 50.0 | 4.42e-01 | 100.0% | 59.1% |
| 4h3uA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 42.0 | 3.35e-01 | 71.2% | 33.1% |
| 2pgeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 53.0 | 4.26e-01 | 100.0% | 56.7% |
| 2cuhA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 42.0 | 3.67e-01 | 71.2% | 64.8% |
| 1nf3C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.61 | 50.0 | 4.09e-01 | 96.6% | 61.0% |
| 3icsA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 40.0 | 2.69e-01 | 71.2% | 15.9% |
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 51.0 | 5.05e-01 | 100.0% | 92.2% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.60 | 53.0 | 3.79e-01 | 100.0% | 39.1% |
| 3ub1D02 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 47.0 | 3.87e-01 | 88.1% | 46.5% |
| 1mgpA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.60 | 50.0 | 4.03e-01 | 100.0% | 47.1% |
| 3qt2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.19e-01 | 100.0% | 79.6% |
| 1ocsA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 51.0 | 4.00e-01 | 100.0% | 75.0% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 46.0 | 3.40e-01 | 91.5% | 31.3% |
| 7rd0A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.59 | 47.0 | 3.04e-01 | 93.2% | 61.8% |
| 3f7xA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 39.0 | 3.14e-01 | 71.2% | 38.3% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.57 | 47.0 | 3.96e-01 | 100.0% | 52.3% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 49.0 | 3.93e-01 | 100.0% | 72.4% |
| 3dm8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 39.0 | 3.05e-01 | 71.2% | 32.6% |
| 1sr4B00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.57 | 47.0 | 3.18e-01 | 100.0% | 32.6% |
| 3cxgA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 47.0 | 3.73e-01 | 93.2% | 71.3% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.55 | 40.0 | 3.36e-01 | 79.7% | 82.9% |
| 2nrhB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 45.0 | 3.43e-01 | 91.5% | 54.2% |
| 1a6aB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.54 | 43.0 | 3.77e-01 | 100.0% | 58.4% |
| 3eo5A01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.54 | 36.0 | 3.30e-01 | 71.2% | 69.3% |
| 4bgjA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 44.0 | 3.69e-01 | 100.0% | 83.1% |
| 6n44A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.41e-01 | 93.2% | 48.2% |
| 2k6vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 47.0 | 3.37e-01 | 98.3% | 78.5% |
| 3i1iB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 44.0 | 2.78e-01 | 100.0% | 20.5% |
| 8gtyA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.53 | 45.0 | 3.22e-01 | 94.9% | 32.9% |
| 2lg7A00 | 2.60.60.50 | Mainly Beta › Sandwich › Lipoxygenase-1 › | 0.52 | 44.0 | 3.40e-01 | 93.2% | 90.7% |
| 4emtA02 | 3.40.50.12100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein | 0.52 | 42.0 | 3.39e-01 | 96.6% | 81.3% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 44.0 | 2.84e-01 | 100.0% | 23.5% |
| 2nvwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 41.0 | 2.98e-01 | 100.0% | 65.5% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591282 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.76 | 52.0 | 4.12e-01 | 71.2% | 35.3% |
| 3258452 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.76 | 67.0 | 5.30e-01 | 100.0% | 56.7% |
| 5036913 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.75 | 52.0 | 4.44e-01 | 71.2% | 95.6% |
| 3385295 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.75 | 59.0 | 3.90e-01 | 84.7% | 33.6% |
| 4984061 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.74 | 63.0 | 3.93e-01 | 93.2% | 25.9% |
| 4945290 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.72 | 59.0 | 5.91e-01 | 100.0% | 90.0% |
| 3676562 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.72 | 55.0 | 3.83e-01 | 100.0% | 24.4% |
| 4930696 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.71 | 48.0 | 3.59e-01 | 71.2% | 44.0% |
| 4955214 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.71 | 59.0 | 3.64e-01 | 93.2% | 23.2% |
| 3983782 | 2484.1.1.119 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1 | 0.70 | 57.0 | 4.93e-01 | 100.0% | 57.4% |
| 1790173 | 243.1.1.39 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TraH_VirB8-like | 0.70 | 48.0 | 3.71e-01 | 71.2% | 34.4% |
| 3622620 | 11.1.1.959 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ILCR1_N | 0.70 | 62.0 | 4.43e-01 | 100.0% | 58.2% |
| 4989642 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.69 | 59.0 | 3.75e-01 | 100.0% | 21.8% |
| 5049952 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.69 | 44.0 | 3.63e-01 | 71.2% | 36.2% |
| 4961941 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 58.0 | 3.54e-01 | 94.9% | 20.6% |
| 3877924 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.69 | 56.0 | 5.03e-01 | 100.0% | 64.7% |
| 5047908 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.68 | 58.0 | 3.59e-01 | 93.2% | 22.7% |
| 6372 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.68 | 46.0 | 3.56e-01 | 71.2% | 31.6% |
| 5055339 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.68 | 58.0 | 3.71e-01 | 93.2% | 27.4% |
| 3255783 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.67 | 50.0 | 4.77e-01 | 81.4% | 74.3% |
| 4440592 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.67 | 45.0 | 3.07e-01 | 71.2% | 53.8% |
| 3693076 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.67 | 56.0 | 4.28e-01 | 98.3% | 66.7% |
| 3409738 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.67 | 52.0 | 5.11e-01 | 86.4% | 84.6% |
| 5029482 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.66 | 52.0 | 4.73e-01 | 86.4% | 75.0% |
| 4168380 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.66 | 45.0 | 3.55e-01 | 71.2% | 32.3% |
| 3739406 | 330.1.1.9 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dcr1-like_dsRNA-bd_dom | 0.66 | 55.0 | 4.71e-01 | 100.0% | 61.0% |
| 5021438 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.66 | 54.0 | 4.60e-01 | 100.0% | 55.0% |
| 6384 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.65 | 44.0 | 3.49e-01 | 71.2% | 32.1% |
| 3273514 | 243.1.1.36 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_5 | 0.65 | 44.0 | 3.45e-01 | 71.2% | 32.3% |
| 5048993 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 53.0 | 4.30e-01 | 98.3% | 48.5% |
| 4988603 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.63 | 53.0 | 3.44e-01 | 100.0% | 86.2% |
| 133841 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.63 | 43.0 | 3.41e-01 | 71.2% | 32.6% |
| 3832543 | 7516.1.1.41 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase | 0.62 | 49.0 | 2.71e-01 | 88.1% | 7.5% |
| 4045121 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.62 | 42.0 | 3.83e-01 | 71.2% | 92.5% |
| 4639619 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.62 | 48.0 | 3.64e-01 | 86.4% | 59.3% |
| 4643780 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.61 | 43.0 | 3.08e-01 | 76.3% | 61.0% |
| 5072273 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 47.0 | 3.83e-01 | 88.1% | 44.2% |
| 3895932 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 53.0 | 4.39e-01 | 100.0% | 83.8% |
| 3834362 | 3832.1.1.2 ↗ | alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › PF25968 | 0.60 | 50.0 | 2.95e-01 | 100.0% | 11.5% |
| 4965879 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.59 | 51.0 | 3.67e-01 | 100.0% | 31.9% |
| 4938125 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.59 | 49.0 | 4.39e-01 | 93.2% | 72.9% |
| 4932428 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.59 | 47.0 | 4.53e-01 | 91.5% | 90.0% |
| 4951932 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.59 | 49.0 | 3.18e-01 | 98.3% | 25.3% |
| 3588750 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.59 | 40.0 | 3.72e-01 | 71.2% | 97.3% |
| 3250857 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 49.0 | 4.39e-01 | 100.0% | 90.0% |
| 4020440 | 7579.1.1.13 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH | 0.57 | 46.0 | 3.17e-01 | 100.0% | 95.6% |
| 3218749 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.57 | 45.0 | 4.56e-01 | 88.1% | 91.7% |
| 5070380 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.57 | 46.0 | 3.11e-01 | 100.0% | 78.3% |
| 3356898 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 46.0 | 3.57e-01 | 96.6% | 84.7% |
| 3759486 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.56 | 47.0 | 4.32e-01 | 98.3% | 75.0% |
| 3799677 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.56 | 49.0 | 3.15e-01 | 98.3% | 26.8% |
| 4262943 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.55 | 42.0 | 3.43e-01 | 86.4% | 51.2% |
| 1159602 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 40.0 | 3.35e-01 | 79.7% | 82.1% |
| 4275948 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.55 | 42.0 | 3.45e-01 | 86.4% | 47.5% |
| 3206632 | 896.1.1.2 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 | 0.55 | 45.0 | 4.04e-01 | 93.2% | 67.1% |
| 5083710 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.54 | 37.0 | 2.52e-01 | 84.7% | 16.6% |
| 4994741 | 244.2.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim | 0.53 | 47.0 | 3.68e-01 | 100.0% | 68.8% |
| 3609894 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.53 | 39.0 | 2.93e-01 | 83.1% | 64.2% |
| 4002087 | 3698.1.1.1 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C | 0.53 | 39.0 | 2.95e-01 | 81.4% | 79.4% |
| 4021847 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.52 | 43.0 | 2.83e-01 | 98.3% | 71.3% |
| 5007104 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.52 | 41.0 | 3.43e-01 | 98.3% | 48.6% |
| 3317450 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 41.0 | 3.55e-01 | 100.0% | 67.3% |
| 4405256 | 2.1.1.20 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Phage_DNA_bind | 0.51 | 42.0 | 3.86e-01 | 100.0% | 94.1% |
| 3618860 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.51 | 34.0 | 2.71e-01 | 72.9% | 49.3% |
| 5040847 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 42.0 | 2.74e-01 | 96.6% | 22.0% |
| 3397417 | 223.1.1.98 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30670 | 0.50 | 36.0 | 2.86e-01 | 74.6% | 38.4% |
| 3898198 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.50 | 43.0 | 3.44e-01 | 98.3% | 48.0% |
D3
high
residues 154-243
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kdsA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 40.0 | 4.12e-01 | 100.0% | 62.8% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 35.0 | 3.68e-01 | 97.8% | 61.3% |
| 2fvgA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.58 | 35.0 | 3.72e-01 | 100.0% | 68.4% |
| 4ze8A03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.57 | 40.0 | 3.06e-01 | 73.3% | 96.7% |
| 4fajA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.56 | 46.0 | 4.17e-01 | 92.2% | 85.5% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 36.0 | 4.14e-01 | 97.8% | 95.3% |
| 2k5gA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 44.0 | 3.59e-01 | 94.4% | 88.9% |
| 1d1rA00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.51 | 39.0 | 4.03e-01 | 85.6% | 89.2% |
| 4oevA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.51 | 41.0 | 3.85e-01 | 90.0% | 87.0% |
| 1mbmA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 36.0 | 3.87e-01 | 92.2% | 89.5% |
| 5mw8A01 | 3.30.200.110 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe | 0.51 | 42.0 | 3.92e-01 | 92.2% | 93.9% |
| 3uqcB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 42.0 | 4.16e-01 | 91.1% | 97.8% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 40.0 | 3.67e-01 | 100.0% | 65.5% |
| 3hbxA03 | 3.90.1150.160 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.50 | 40.0 | 4.06e-01 | 91.1% | 88.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3910727 | 4.1.1.353 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 | 0.73 | 46.0 | 5.41e-01 | 100.0% | 89.2% |
| 4024411 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 34.0 | 4.20e-01 | 95.6% | 76.4% |
| 2803945 | 4.1.1.24 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e | 0.68 | 39.0 | 3.38e-01 | 98.9% | 36.9% |
| 3801791 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 38.0 | 4.34e-01 | 100.0% | 76.9% |
| 5038405 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 35.0 | 4.47e-01 | 100.0% | 100.0% |
| 4269256 | 4.1.1.245 ↗ | beta barrels › SH3 › SH3 › SH3 › SspH | 0.65 | 37.0 | 4.37e-01 | 100.0% | 83.3% |
| 2327295 | 6041.1.1.0 ↗ | a+b two layers › DUF1107-like › DUF1107-like › DUF1107-like | 0.59 | 37.0 | 3.60e-01 | 93.3% | 55.4% |
| 4259149 | 304.136.1.1 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SBP_bac_5 | 0.56 | 48.0 | 4.33e-01 | 95.6% | 91.2% |
| 4061485 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.54 | 39.0 | 3.15e-01 | 76.7% | 61.1% |
| 3282357 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.53 | 38.0 | 2.53e-01 | 76.7% | 23.9% |
| 4958477 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 38.0 | 3.86e-01 | 98.9% | 81.1% |