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ALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00272

Bact-Vir

ALT_09252017_20_scaffold_111_prodigal-single.1__X__X__00272

Identity

Kingdom:
phage

Quality

82.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-110
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 48.0 5.79e-01 90.1% 100.0%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.75 47.0 5.47e-01 78.9% 93.8%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 47.0 5.39e-01 78.9% 86.8%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 49.0 5.03e-01 87.3% 71.0%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.74 48.0 5.42e-01 83.1% 94.0%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 49.0 5.05e-01 83.1% 74.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 46.0 5.07e-01 78.9% 83.9%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 52.0 4.86e-01 78.9% 64.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.70 44.0 5.06e-01 84.5% 90.0%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 47.0 4.87e-01 84.5% 73.5%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.70 43.0 4.97e-01 80.3% 90.0%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 46.0 5.20e-01 80.3% 92.6%
1irxA02 2.30.30.300 Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like 0.68 40.0 4.83e-01 73.2% 97.7%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 48.0 5.38e-01 78.9% 100.0%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 56.0 5.70e-01 88.7% 100.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 53.0 5.43e-01 90.1% 87.1%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 51.0 5.39e-01 81.7% 96.9%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 51.0 5.44e-01 85.9% 95.1%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.81e-01 84.5% 81.0%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.67e-01 78.9% 74.3%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 5.52e-01 98.6% 95.4%
1dj7B00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 4.79e-01 78.9% 94.5%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.91e-01 84.5% 85.5%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 4.93e-01 80.3% 87.1%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 48.0 5.08e-01 84.5% 96.7%
3gasA01 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.62 45.0 4.34e-01 76.1% 91.1%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.62e-01 83.1% 90.9%
3havA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 42.0 3.90e-01 70.4% 91.0%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 50.0 4.93e-01 100.0% 83.3%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 46.0 4.51e-01 84.5% 85.0%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.60 44.0 4.60e-01 85.9% 86.4%
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.60 41.0 4.12e-01 73.2% 82.4%
7d8gA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.58 43.0 3.25e-01 78.9% 54.5%
5j60B02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 41.0 3.52e-01 78.9% 95.8%
3a5pA00 2.60.200.70 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.56 38.0 3.39e-01 70.4% 93.2%
4v0bA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.55 38.0 3.95e-01 73.2% 81.0%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 41.0 2.91e-01 84.5% 93.8%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.53 39.0 3.60e-01 91.5% 59.8%
5kmpB00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.52 44.0 2.83e-01 100.0% 40.5%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 37.0 3.63e-01 77.5% 68.4%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 37.0 3.09e-01 78.9% 62.0%
3rriA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 34.0 2.79e-01 70.4% 72.5%
3e9mB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 41.0 3.07e-01 93.0% 98.5%
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.50 36.0 3.08e-01 91.5% 43.4%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4116921 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.87 51.0 5.53e-01 78.9% 70.0%
3956735 6055.1.1.1 extended segments › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › YajC 0.87 52.0 6.41e-01 80.3% 95.6%
4611708 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.85 49.0 5.29e-01 77.5% 68.3%
3278801 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.83 52.0 5.40e-01 85.9% 69.2%
3989139 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.83 50.0 5.29e-01 83.1% 67.7%
3839849 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.83 50.0 5.29e-01 84.5% 67.7%
4009688 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.79 49.0 5.16e-01 81.7% 69.2%
4165723 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.79 49.0 5.13e-01 81.7% 69.2%
4347999 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.79 50.0 5.21e-01 90.1% 70.8%
4662947 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.79 50.0 5.22e-01 84.5% 70.8%
3964733 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 50.0 5.55e-01 80.3% 83.6%
3938589 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.77 48.0 5.59e-01 78.9% 90.0%
3609597 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.77 46.0 5.00e-01 83.1% 71.7%
5051148 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 42.0 4.57e-01 73.2% 65.0%
4321173 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.76 47.0 5.20e-01 83.1% 77.6%
4844109 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.75 46.0 4.68e-01 76.1% 62.0%
3546607 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.75 47.0 5.38e-01 78.9% 90.0%
3299797 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.74 47.0 5.06e-01 80.3% 76.7%
3414063 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.74 50.0 5.64e-01 78.9% 90.9%
3420348 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.74 47.0 5.20e-01 78.9% 83.6%
4030603 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 54.0 5.57e-01 83.1% 80.9%
4368811 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.73 48.0 5.35e-01 81.7% 87.3%
5002601 4.1.1.485 beta barrels › SH3 › SH3 › SH3 › DUF6897 0.73 47.0 5.12e-01 78.9% 79.7%
3706786 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 50.0 4.93e-01 80.3% 68.0%
1145920 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 47.0 4.46e-01 84.5% 56.6%
3264883 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.72 50.0 5.48e-01 84.5% 92.7%
3326980 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 47.0 5.03e-01 80.3% 78.3%
3270324 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 47.0 5.49e-01 78.9% 96.0%
3817476 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 45.0 5.23e-01 78.9% 92.0%
3428486 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.71 46.0 4.47e-01 80.3% 58.7%
5057234 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 49.0 4.92e-01 81.7% 71.4%
3495480 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 54.0 5.83e-01 87.3% 95.0%
4147366 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.71 46.0 5.28e-01 80.3% 97.9%
4862202 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.71 46.0 5.37e-01 87.3% 98.0%
4024411 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.47e-01 93.0% 94.5%
4214438 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 50.0 5.18e-01 80.3% 80.0%
5028741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 47.0 5.14e-01 80.3% 87.3%
4030850 4.1.1.165 beta barrels › SH3 › SH3 › SH3 › DUF6501 0.70 51.0 4.78e-01 77.5% 63.5%
3165077 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.70 51.0 5.15e-01 76.1% 88.6%
3602921 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 47.0 5.24e-01 84.5% 90.9%
3937333 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 49.0 4.70e-01 81.7% 65.0%
3903213 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 45.0 3.36e-01 80.3% 26.9%
3840076 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.69 50.0 5.37e-01 76.1% 100.0%
3480350 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 51.0 5.34e-01 80.3% 86.2%
3224441 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 49.0 5.07e-01 77.5% 79.4%
3924338 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 52.0 5.23e-01 80.3% 81.4%
4331473 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.68 52.0 5.03e-01 100.0% 72.5%
3514867 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 53.0 5.23e-01 84.5% 78.7%
3947337 219.1.1.18 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.68 45.0 3.44e-01 84.5% 31.0%
4218142 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.68 47.0 4.16e-01 84.5% 51.0%
3934126 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 48.0 5.22e-01 78.9% 88.3%
3649741 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 44.0 4.41e-01 84.5% 64.0%
4046385 219.1.1.18 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.67 44.0 3.52e-01 84.5% 34.3%
5080336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 46.0 4.85e-01 80.3% 79.7%
5063004 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 52.0 5.44e-01 83.1% 95.4%
3246255 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 52.0 5.26e-01 87.3% 84.3%
3899828 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 51.0 4.92e-01 84.5% 73.8%
3900733 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 51.0 5.19e-01 85.9% 90.0%
3300848 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.64 45.0 4.01e-01 100.0% 50.5%
3841524 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 52.0 4.51e-01 88.7% 57.3%
3443078 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.63 56.0 4.20e-01 100.0% 68.0%
3958137 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 48.0 4.54e-01 85.9% 73.3%
3926672 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 48.0 5.03e-01 84.5% 89.2%
4418620 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 51.0 2.85e-01 100.0% 89.0%
3775592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 51.0 2.74e-01 100.0% 80.6%
3620554 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.30e-01 91.5% 84.2%
3785795 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.56 38.0 3.65e-01 70.4% 61.3%
3590658 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.43e-01 84.5% 91.4%
3195689 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.56 37.0 3.42e-01 70.4% 51.6%
3959903 243.18.1.1 a+b two layers › Cystatin-like › Maltokinase N-terminal domain › Maltokinase N-terminal domain › Mak_N_cap 0.52 42.0 3.06e-01 88.7% 37.1%
3601847 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.52 38.0 3.28e-01 81.7% 68.0%