←Back to structures
ALT_09252017_20_scaffold_146_prodigal-single.1__X__X__00095
Bact-VirALT_09252017_20_scaffold_146_prodigal-single.1__X__X__00095
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 27-116_189-224
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_238879_prodigal-single.1__X__X__00285__D27-134_208-253
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g3sA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.71 | 49.0 | 4.85e-01 | 70.6% | 83.5% |
| 5ktaA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.65 | 46.0 | 4.11e-01 | 73.0% | 96.6% |
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.64 | 40.0 | 4.56e-01 | 73.8% | 83.2% |
| 3r1kA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 44.0 | 4.10e-01 | 71.4% | 75.3% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 27.0 | 3.28e-01 | 91.3% | 63.0% |
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.59 | 33.0 | 3.25e-01 | 93.7% | 50.7% |
| 3t7yA00 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.58 | 34.0 | 3.85e-01 | 96.0% | 76.6% |
| 2v5gA00 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.57 | 35.0 | 3.57e-01 | 96.8% | 62.5% |
| 6z0wA01 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.56 | 34.0 | 3.61e-01 | 97.6% | 66.7% |
| 7vljA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 28.0 | 3.23e-01 | 79.4% | 67.7% |
| 3igrA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 49.0 | 4.25e-01 | 97.6% | 88.0% |
| 4h0pA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 42.0 | 3.60e-01 | 84.9% | 95.1% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 23.0 | 3.03e-01 | 78.6% | 78.7% |
| 1yreC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 45.0 | 3.99e-01 | 96.8% | 82.4% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 40.0 | 3.48e-01 | 83.3% | 93.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5063704 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.73 | 30.0 | 4.17e-01 | 95.2% | 75.4% |
| 3785270 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.72 | 50.0 | 4.69e-01 | 71.4% | 82.6% |
| 4030251 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.68 | 53.0 | 4.64e-01 | 82.5% | 89.5% |
| 3941607 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.65 | 45.0 | 3.68e-01 | 71.4% | 77.8% |
| 4991489 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 29.0 | 3.73e-01 | 96.8% | 75.7% |
| 3404177 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.60 | 30.0 | 3.12e-01 | 98.4% | 49.6% |
| 3421095 | 3521.1.1.4 ↗ | a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › SWIM | 0.57 | 38.0 | 4.36e-01 | 70.6% | 94.4% |
| 4945000 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.56 | 50.0 | 3.79e-01 | 94.4% | 53.2% |
| 4170432 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.55 | 40.0 | 4.07e-01 | 75.4% | 94.4% |
| 4065198 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.53 | 42.0 | 2.98e-01 | 84.9% | 98.2% |
| 154280 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.53 | 42.0 | 3.58e-01 | 84.9% | 93.7% |
| 5047128 | 3662.1.1.0 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related | 0.52 | 38.0 | 4.09e-01 | 77.0% | 90.8% |
| 4229035 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.52 | 42.0 | 3.60e-01 | 84.9% | 94.0% |
| 3978055 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.52 | 42.0 | 3.54e-01 | 84.9% | 90.2% |
| 4683341 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.51 | 41.0 | 3.48e-01 | 84.9% | 93.5% |
| 3965170 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.50 | 45.0 | 3.95e-01 | 96.8% | 81.1% |
D2
medium
residues 117-188
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5gneA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 44.0 | 3.11e-01 | 94.4% | 99.6% |
| 3io1A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 41.0 | 2.92e-01 | 91.7% | 97.5% |
| 2zxkA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.51 | 40.0 | 2.78e-01 | 86.1% | 90.6% |
| 2g6gA02 | 2.40.240.50 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Barwin-like endoglucanases | 0.51 | 40.0 | 3.04e-01 | 87.5% | 75.4% |
| 3czbA02 | 2.40.240.50 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Barwin-like endoglucanases | 0.50 | 35.0 | 2.82e-01 | 73.6% | 65.2% |
| 2f4wB00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.50 | 36.0 | 2.98e-01 | 80.6% | 92.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940288 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.51 | 41.0 | 2.62e-01 | 90.3% | 40.8% |
| 4070349 | 213.1.1.7 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB | 0.51 | 41.0 | 2.78e-01 | 98.6% | 89.9% |