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ALT_09252017_20_scaffold_146_prodigal-single.1__X__X__00134

Bact-Vir

ALT_09252017_20_scaffold_146_prodigal-single.1__X__X__00134

Identity

Kingdom:
phage

Quality

82.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-87
PDB
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ztbA03 2.60.40.3040 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 40.0 4.97e-01 87.1% 100.0%
1vw4U00 3.30.1390.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 0.66 52.0 5.37e-01 94.1% 86.6%
3s7iB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 45.0 3.47e-01 70.6% 32.4%
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.65 44.0 4.48e-01 70.6% 76.5%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.65 46.0 3.85e-01 74.1% 46.6%
3tcaA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.65 36.0 3.58e-01 77.6% 51.1%
7vt4A01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.64 45.0 3.90e-01 72.9% 58.6%
2zutA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 34.0 3.98e-01 71.8% 74.6%
1yudA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 43.0 3.55e-01 70.6% 43.2%
7zvmA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 39.0 3.74e-01 70.6% 53.9%
2vqaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 47.0 3.74e-01 83.5% 75.1%
1zvfB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 42.0 3.38e-01 70.6% 37.2%
6l9iA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 46.0 3.62e-01 82.4% 72.2%
3thpA02 2.60.120.1520 Mainly Beta › Sandwich › Jelly Rolls › 0.60 41.0 3.37e-01 70.6% 57.9%
1cauA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 41.0 3.27e-01 71.8% 33.7%
1gqgC02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 48.0 3.74e-01 90.6% 74.1%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.58 41.0 3.90e-01 74.1% 99.0%
2qnkA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 50.0 3.50e-01 97.6% 54.2%
2lw3A00 2.60.40.2880 Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain 0.56 38.0 3.79e-01 71.8% 72.2%
3j26N01 2.60.120.1100 Mainly Beta › Sandwich › Jelly Rolls › 0.53 38.0 3.09e-01 75.3% 77.1%
5z6pA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.52 45.0 3.62e-01 100.0% 97.2%
2r5rA00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.50 41.0 2.95e-01 89.4% 60.6%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1331 10.12.1.31 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_5 0.67 46.0 3.86e-01 70.6% 47.1%
4144851 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.67 45.0 3.42e-01 70.6% 30.5%
3727573 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.66 45.0 3.36e-01 70.6% 29.8%
4945546 10.7.1.0 beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.66 45.0 4.23e-01 71.8% 61.0%
3655985 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.65 44.0 3.89e-01 70.6% 48.8%
None 0.64 44.0 3.34e-01 70.6% 31.3%
5027590 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.64 43.0 3.74e-01 70.6% 45.9%
4215468 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.64 56.0 3.51e-01 97.6% 42.6%
4195115 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.63 49.0 3.45e-01 83.5% 63.5%
3999000 10.7.1.0 beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.63 43.0 4.37e-01 71.8% 77.6%
3371935 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.62 50.0 3.86e-01 87.1% 73.2%
4940648 10.12.1.34 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › GPI 0.62 51.0 3.67e-01 88.2% 47.0%
3448723 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.62 48.0 3.68e-01 83.5% 72.6%
3428742 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.61 53.0 3.55e-01 96.5% 47.8%
3833580 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.61 53.0 3.96e-01 96.5% 72.7%
3650101 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.61 54.0 3.32e-01 97.6% 68.0%
3447505 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.61 48.0 3.50e-01 84.7% 74.9%
3747717 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.61 47.0 3.38e-01 84.7% 52.7%
4588060 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.61 47.0 3.52e-01 83.5% 68.4%
4439358 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.61 52.0 3.42e-01 96.5% 40.8%
1030885 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.60 47.0 3.59e-01 84.7% 66.5%
3691764 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.60 52.0 3.38e-01 97.6% 60.1%
2129545 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.59 48.0 3.56e-01 90.6% 57.7%
None 0.59 48.0 3.56e-01 90.6% 59.0%
3554223 10.12.1.30 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 3-HAO 0.56 46.0 3.64e-01 90.6% 75.6%
4945380 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.56 46.0 3.32e-01 91.8% 94.6%
None 0.56 45.0 3.62e-01 90.6% 75.6%
4862637 10.12.1.29 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CDO_I 0.55 37.0 3.22e-01 70.6% 42.8%
5030148 10.12.1.34 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › GPI 0.55 49.0 3.56e-01 100.0% 57.6%
3400155 10.12.1.62 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_cat 0.54 43.0 3.26e-01 84.7% 45.0%
3958252 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.53 43.0 3.77e-01 90.6% 64.9%
3798341 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.51 40.0 3.08e-01 87.1% 52.1%
3741825 10.12.1.12 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD 0.51 38.0 2.59e-01 83.5% 72.3%
3405655 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.51 35.0 2.63e-01 72.9% 60.4%
3394965 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.51 35.0 2.74e-01 71.8% 69.0%