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ALT_09252017_20_scaffold_16_prodigal-single.1__X__X__00265
Bact-VirALT_09252017_20_scaffold_16_prodigal-single.1__X__X__00265
Identity
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 106-148
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ucxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.82 | 62.0 | 3.76e-01 | 81.4% | 93.4% |
| 2x26B03 | 6.10.10.20 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.80 | 54.0 | 5.81e-01 | 83.7% | 88.2% |
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.75 | 57.0 | 4.64e-01 | 83.7% | 43.9% |
| 1furB03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.75 | 52.0 | 4.93e-01 | 72.1% | 60.8% |
| 2f4qA02 | 1.10.132.120 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.71 | 64.0 | 4.51e-01 | 100.0% | 34.6% |
| 3h0dA01 | 3.30.56.130 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain | 0.66 | 49.0 | 4.25e-01 | 83.7% | 66.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3241360 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.85 | 68.0 | 5.85e-01 | 86.0% | 58.5% |
| 3191688 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.83 | 67.0 | 4.03e-01 | 97.7% | 14.1% |
| 3219554 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.69 | 54.0 | 5.31e-01 | 100.0% | 88.0% |
| 5079692 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.66 | 58.0 | 4.23e-01 | 100.0% | 89.6% |
| 3435095 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.64 | 52.0 | 5.16e-01 | 97.7% | 88.9% |
D2
medium
residues 188-241
Domain cluster:
rep: OR003939.1__WJZ48056.1__X__00008__D45-94