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ALT_09252017_20_scaffold_186_prodigal-single.1__X__X__00006

Bact-Vir

ALT_09252017_20_scaffold_186_prodigal-single.1__X__X__00006

Identity

Kingdom:
phage

Quality

70.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-64
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.56 37.0 3.12e-01 71.9% 40.2%
4qarA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.53 39.0 2.90e-01 82.8% 74.4%
3c4nA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.50 34.0 2.80e-01 70.3% 46.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3398945 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.54 43.0 3.59e-01 90.6% 96.7%
3401189 391.1.2.1 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC 0.53 35.0 3.57e-01 89.1% 69.2%
3509403 6129.1.1.0 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.53 37.0 2.60e-01 78.1% 38.4%
3858171 6129.1.1.0 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.52 37.0 2.62e-01 78.1% 39.6%
3464873 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 43.0 2.85e-01 100.0% 92.4%