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ALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00024
Bact-VirALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00024
Identity
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.59 | 48.0 | 2.91e-01 | 96.7% | 40.7% |
| 2k4nA00 | 3.30.720.70 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.54 | 40.0 | 3.44e-01 | 100.0% | 45.9% |
| 4dy0B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 33.0 | 2.69e-01 | 100.0% | 28.1% |
| 2o1cA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 34.0 | 2.73e-01 | 100.0% | 29.3% |
| 1uhvA01 | 2.60.40.1500 | Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 | 0.50 | 41.0 | 3.16e-01 | 95.0% | 78.2% |
| 4f0aB02 | 3.30.2460.20 | Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Wnt (Wingless and Int-1), C-terminal domain | 0.50 | 38.0 | 3.74e-01 | 98.3% | 77.9% |
| 7w0aA02 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.50 | 39.0 | 3.18e-01 | 90.0% | 88.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3990364 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 43.0 | 3.19e-01 | 88.3% | 90.8% |
| 4022277 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.51 | 43.0 | 3.60e-01 | 100.0% | 77.0% |
| 4332532 | 5.1.4.309 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF29630 | 0.51 | 41.0 | 2.55e-01 | 96.7% | 23.8% |
| 3939937 | 5052.1.1.1 ↗ | alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein › SDF | 0.50 | 37.0 | 2.30e-01 | 93.3% | 11.6% |
D2
medium
residues 61-121
Domain cluster:
representative