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ALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00064
Bact-VirALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00064
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-228
Domain cluster:
rep: BML_coassembly_scaffold_35_prodigal-single.1__X__X__00358__D33-214
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01223.30 best | Endonuclease_NS | 119.2 | 3.10e-34 | 100.0% | 86.6% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qn0B00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.94 | 92.0 | 8.29e-01 | 100.0% | 84.5% |
| 4a1nA01 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.94 | 92.0 | 8.26e-01 | 100.0% | 84.2% |
| 1zm8A00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.92 | 90.0 | 8.11e-01 | 100.0% | 80.8% |
| 1ql0A00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.92 | 90.0 | 8.03e-01 | 100.0% | 79.7% |
| 5inhA04 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.89 | 86.0 | 7.17e-01 | 100.0% | 75.8% |
| 4gtwB02 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.80 | 77.0 | 6.50e-01 | 100.0% | 72.1% |
| 2xgrA00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.72 | 59.0 | 5.79e-01 | 88.2% | 79.7% |
| 2iayA00 | 3.30.1820.10 | Alpha Beta › 2-Layer Sandwich › Lp2179-like fold › Lp2179-like | 0.59 | 25.0 | 3.19e-01 | 96.8% | 64.0% |
| 3daaA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.57 | 31.0 | 3.81e-01 | 77.4% | 82.2% |
| 2ijrA01 | 3.30.70.1270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Api92-like domains | 0.56 | 24.0 | 3.24e-01 | 94.6% | 74.2% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 33.0 | 3.95e-01 | 87.6% | 93.5% |
| 1s68A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.53 | 33.0 | 3.99e-01 | 92.5% | 100.0% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 33.0 | 3.96e-01 | 79.6% | 95.2% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2650317 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.95 | 92.0 | 8.63e-01 | 100.0% | 91.3% |
| 2468298 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.94 | 92.0 | 8.17e-01 | 100.0% | 82.1% |
| 3739928 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.94 | 91.0 | 8.02e-01 | 100.0% | 81.0% |
| 3262291 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.94 | 91.0 | 7.55e-01 | 100.0% | 77.3% |
| 3406079 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.94 | 91.0 | 8.20e-01 | 100.0% | 85.0% |
| 3387043 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.94 | 87.0 | 8.48e-01 | 97.3% | 89.4% |
| 147158 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.93 | 91.0 | 8.21e-01 | 100.0% | 83.5% |
| 8232 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.92 | 90.0 | 8.09e-01 | 100.0% | 80.4% |
| 3977947 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.92 | 90.0 | 8.01e-01 | 100.0% | 79.1% |
| 3718195 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.92 | 90.0 | 7.79e-01 | 100.0% | 76.0% |
| 8231 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.92 | 90.0 | 8.03e-01 | 100.0% | 79.7% |
| 3699383 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.92 | 90.0 | 7.68e-01 | 100.0% | 77.4% |
| 2860134 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.89 | 86.0 | 6.94e-01 | 100.0% | 68.7% |
| 3969210 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.89 | 86.0 | 7.20e-01 | 100.0% | 69.8% |
| 4494462 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.88 | 85.0 | 7.07e-01 | 100.0% | 72.9% |
| 3601605 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.88 | 85.0 | 7.64e-01 | 100.0% | 82.2% |
| 3415806 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.87 | 84.0 | 7.04e-01 | 100.0% | 89.7% |
| 3407640 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.87 | 84.0 | 7.02e-01 | 100.0% | 89.7% |
| 3400563 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.87 | 84.0 | 7.02e-01 | 100.0% | 88.2% |
| 3883616 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.87 | 84.0 | 7.24e-01 | 100.0% | 82.3% |
| 3907410 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.87 | 83.0 | 7.42e-01 | 100.0% | 79.4% |
| 3907317 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.86 | 83.0 | 7.25e-01 | 100.0% | 82.3% |
| 3889557 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.86 | 82.0 | 7.80e-01 | 100.0% | 87.5% |
| 3576971 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.86 | 79.0 | 7.53e-01 | 100.0% | 83.8% |
| 3921416 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.86 | 82.0 | 7.19e-01 | 100.0% | 86.5% |
| 3921364 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.85 | 82.0 | 7.14e-01 | 100.0% | 76.8% |
| 3411641 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.84 | 80.0 | 7.02e-01 | 98.4% | 93.7% |
| 3396412 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.84 | 81.0 | 7.32e-01 | 100.0% | 91.2% |
| 3882094 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.83 | 80.0 | 7.28e-01 | 100.0% | 83.3% |
| 3589217 | 378.1.1.11 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclea_NS_2 | 0.82 | 62.0 | 6.18e-01 | 88.2% | 75.8% |
| 3857855 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.79 | 75.0 | 6.51e-01 | 100.0% | 75.9% |
| 4953417 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.75 | 26.0 | 4.26e-01 | 81.2% | 84.3% |
| 4945471 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 24.0 | 3.99e-01 | 91.4% | 89.2% |
| 4960250 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.60 | 31.0 | 4.05e-01 | 93.0% | 90.0% |
| 4964560 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.60 | 31.0 | 3.96e-01 | 93.0% | 85.7% |
| 5033471 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.57 | 24.0 | 3.05e-01 | 90.9% | 62.9% |