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ALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00066
Bact-VirALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00066
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-115
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o0pA00 | 3.20.170.20 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Protein of unknown function DUF952 | 0.76 | 64.0 | 6.07e-01 | 100.0% | 77.2% |
| 1dtdB00 | 3.30.1040.10 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › Carboxypeptidase inhibitor | 0.51 | 31.0 | 3.60e-01 | 100.0% | 96.7% |
D2
medium
residues 116-178
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4u63A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.74 | 43.0 | 3.10e-01 | 100.0% | 20.7% |
| 4eqsA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 39.0 | 2.99e-01 | 100.0% | 27.3% |
| 2yogA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 41.0 | 2.83e-01 | 84.1% | 20.8% |
| 1o4wA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.61 | 40.0 | 3.20e-01 | 100.0% | 34.4% |
| 5ktkA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 47.0 | 2.83e-01 | 100.0% | 11.9% |
| 2hu8A02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 42.0 | 2.87e-01 | 79.4% | 49.0% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.58 | 34.0 | 3.10e-01 | 82.5% | 41.9% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.58 | 39.0 | 3.20e-01 | 74.6% | 36.1% |
| 3cgbA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 38.0 | 2.90e-01 | 100.0% | 28.9% |
| 1wy5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 39.0 | 2.76e-01 | 73.0% | 21.7% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.57 | 35.0 | 2.72e-01 | 100.0% | 25.5% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 39.0 | 3.04e-01 | 100.0% | 33.8% |
| 4isbA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.56 | 47.0 | 2.91e-01 | 95.2% | 54.0% |
| 1rrmA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 40.0 | 2.93e-01 | 77.8% | 53.8% |
| 5hciC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 42.0 | 2.87e-01 | 85.7% | 22.4% |
| 5ywwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.54 | 40.0 | 3.35e-01 | 100.0% | 43.5% |
| 3zdbA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.52 | 40.0 | 3.10e-01 | 88.9% | 66.2% |
| 3frhA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 39.0 | 2.97e-01 | 90.5% | 45.9% |
| 2ebfX04 | 3.40.50.11550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 47.0 | 3.07e-01 | 100.0% | 25.7% |
| 2gmhA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 44.0 | 2.94e-01 | 100.0% | 25.7% |
| 1l5aA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 38.0 | 2.79e-01 | 84.1% | 81.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5067053 | 101.1.2.879 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF134 | 0.62 | 55.0 | 5.38e-01 | 100.0% | 90.0% |
| 5064701 | 101.1.2.879 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF134 | 0.61 | 55.0 | 5.11e-01 | 100.0% | 78.8% |
| 4980021 | 101.1.3.33 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 | 0.61 | 55.0 | 5.32e-01 | 100.0% | 90.0% |
| 4539035 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.56 | 42.0 | 2.88e-01 | 81.0% | 60.0% |
| 3790238 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.55 | 42.0 | 2.88e-01 | 81.0% | 47.0% |
| 3484303 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.55 | 38.0 | 2.67e-01 | 71.4% | 38.4% |
| 5049771 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.55 | 45.0 | 3.16e-01 | 95.2% | 32.4% |
| None | — | 0.55 | 40.0 | 2.80e-01 | 77.8% | 53.9% | |
| 5051100 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 41.0 | 2.64e-01 | 79.4% | 41.5% |
| 5044998 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.54 | 44.0 | 3.24e-01 | 100.0% | 37.6% |
| 4092306 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.53 | 42.0 | 3.00e-01 | 84.1% | 52.8% |
| 4518593 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.53 | 40.0 | 2.80e-01 | 81.0% | 53.2% |
| 3486353 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.52 | 42.0 | 3.03e-01 | 95.2% | 84.2% |
| 3602821 | 3003.1.1.0 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | 0.52 | 40.0 | 3.70e-01 | 90.5% | 64.4% |
| 3173252 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.52 | 39.0 | 2.51e-01 | 81.0% | 43.2% |
| 5055638 | 2006.1.4.19 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N | 0.51 | 41.0 | 2.97e-01 | 95.2% | 89.0% |
| 4933316 | 2006.1.4.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I | 0.51 | 41.0 | 2.93e-01 | 96.8% | 89.3% |
| 3645022 | 2005.1.1.43 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd | 0.51 | 37.0 | 2.74e-01 | 100.0% | 29.7% |
| 4237276 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.51 | 41.0 | 2.96e-01 | 95.2% | 88.6% |
| 4395983 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.50 | 41.0 | 2.93e-01 | 96.8% | 90.9% |
| 4948439 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.50 | 40.0 | 2.90e-01 | 92.1% | 88.0% |