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ALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00174
Bact-VirALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00174
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-176
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04055.28 best | Radical_SAM | 32.5 | 1.30e-07 | 84.9% | 65.1% |
| PF13353.12 | Fer4_12 | 26.5 | 1.00e-05 | 76.2% | 78.1% |
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m7tA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.81 | 67.0 | 5.82e-01 | 100.0% | 59.8% |
| 4k36B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 63.0 | 4.86e-01 | 90.7% | 63.2% |
| 7pd2B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 62.0 | 4.87e-01 | 98.8% | 55.2% |
| 6y1xB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 61.0 | 5.38e-01 | 99.4% | 82.9% |
| 4ldaB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 39.0 | 4.46e-01 | 98.3% | 83.5% |
| 3wnkA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 56.0 | 4.42e-01 | 95.3% | 85.1% |
| 3qkwB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.59 | 51.0 | 5.13e-01 | 100.0% | 90.2% |
| 3h49B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 54.0 | 4.48e-01 | 98.8% | 93.3% |
| 2amxB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 51.0 | 4.07e-01 | 95.3% | 95.8% |
| 3eegB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 51.0 | 4.41e-01 | 94.8% | 66.5% |
| 1vr6A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 51.0 | 4.36e-01 | 100.0% | 59.7% |
| 4ew6A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 39.0 | 4.56e-01 | 97.1% | 97.5% |
| 2fliC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 49.0 | 4.51e-01 | 98.8% | 70.8% |
| 1gcyA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 51.0 | 4.08e-01 | 97.7% | 67.5% |
| 3dxiA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 53.0 | 4.42e-01 | 100.0% | 74.2% |
| 8c9vA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 40.0 | 4.02e-01 | 94.8% | 68.0% |
| 1nvmA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 49.0 | 4.26e-01 | 100.0% | 59.6% |
| 1mumA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.57 | 52.0 | 4.37e-01 | 100.0% | 64.7% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 53.0 | 4.43e-01 | 100.0% | 78.2% |
| 1l6wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 46.0 | 4.28e-01 | 100.0% | 68.6% |
| 1geqB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 51.0 | 4.53e-01 | 100.0% | 69.8% |
| 1e40A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 50.0 | 3.90e-01 | 100.0% | 75.3% |
| 2h3hB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 40.0 | 4.16e-01 | 76.7% | 79.6% |
| 4ml9A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 50.0 | 4.33e-01 | 100.0% | 69.9% |
| 6bmaA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 46.0 | 4.06e-01 | 89.5% | 62.9% |
| 1qv9A01 | 3.40.50.10830 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) | 0.55 | 47.0 | 4.92e-01 | 97.1% | 99.4% |
| 1lsuA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 40.0 | 4.52e-01 | 88.4% | 96.3% |
| 1tltA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 37.0 | 4.35e-01 | 95.9% | 100.0% |
| 4zpjA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 45.0 | 4.56e-01 | 99.4% | 87.7% |
| 4fb7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 47.0 | 4.03e-01 | 90.7% | 61.3% |
| 3b5vA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 46.0 | 4.10e-01 | 90.1% | 65.2% |
| 5jc8C00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 50.0 | 4.36e-01 | 98.3% | 95.6% |
| 2e4uA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 45.0 | 4.53e-01 | 94.2% | 88.4% |
| 7pt4A01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.54 | 45.0 | 4.33e-01 | 97.7% | 78.9% |
| 1qwgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 49.0 | 4.36e-01 | 100.0% | 70.1% |
| 3fhlA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 38.0 | 4.17e-01 | 98.8% | 89.9% |
| 1m3uA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.54 | 49.0 | 4.27e-01 | 100.0% | 88.9% |
| 3d02A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 43.0 | 4.67e-01 | 97.1% | 100.0% |
| 6gt9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 40.0 | 4.01e-01 | 76.7% | 89.1% |
| 3ezyA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 37.0 | 4.27e-01 | 95.9% | 100.0% |
| 3ucxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 48.0 | 4.22e-01 | 98.8% | 96.9% |
| 3euaF01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 37.0 | 3.92e-01 | 86.0% | 79.5% |
| 1jcmP00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 4.07e-01 | 97.7% | 64.1% |
| 4pg4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 40.0 | 4.18e-01 | 99.4% | 86.3% |
| 3d02A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 38.0 | 4.01e-01 | 91.3% | 83.0% |
| 2uz1A03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.52 | 46.0 | 4.50e-01 | 99.4% | 85.9% |
| 1fuyB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 37.0 | 3.79e-01 | 85.5% | 75.0% |
| 4rxtA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 35.0 | 3.70e-01 | 98.3% | 74.7% |
| 4j2hA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 48.0 | 4.18e-01 | 98.8% | 96.0% |
| 3u31A01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.52 | 39.0 | 4.05e-01 | 86.0% | 82.9% |
| 3lhlA00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.51 | 45.0 | 3.96e-01 | 100.0% | 73.9% |
| 2vp8B00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.50 | 46.0 | 4.16e-01 | 100.0% | 73.3% |
| 2g5cA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 45.0 | 4.56e-01 | 98.3% | 97.6% |
| 1o1zA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.50 | 45.0 | 4.15e-01 | 98.8% | 76.5% |
| 3ksuB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 46.0 | 4.20e-01 | 98.8% | 96.9% |
| 3hnoA01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 37.0 | 3.45e-01 | 77.3% | 84.6% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388038 | 2002.1.1.232 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 | 0.87 | 73.0 | 5.89e-01 | 100.0% | 50.5% |
| 5075879 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.83 | 68.0 | 6.05e-01 | 99.4% | 62.8% |
| 4946054 | 2002.1.1.442 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Mob_synth_C | 0.81 | 68.0 | 5.55e-01 | 86.6% | 79.7% |
| 5051987 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 67.0 | 5.29e-01 | 87.8% | 66.2% |
| 4958342 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.79 | 67.0 | 5.10e-01 | 88.4% | 61.6% |
| 5035420 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 66.0 | 5.37e-01 | 87.8% | 79.7% |
| 4210104 | 2002.1.1.121 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C | 0.78 | 65.0 | 5.18e-01 | 87.2% | 76.9% |
| 5044430 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.78 | 64.0 | 5.43e-01 | 86.0% | 88.3% |
| 4986886 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.76 | 69.0 | 5.34e-01 | 94.8% | 66.0% |
| 5067443 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.76 | 68.0 | 5.12e-01 | 94.8% | 92.2% |
| 5056448 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 70.0 | 5.50e-01 | 100.0% | 59.8% |
| 3603477 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 63.0 | 5.32e-01 | 90.1% | 75.4% |
| 4280202 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 63.0 | 5.45e-01 | 90.1% | 85.9% |
| 4979879 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 65.0 | 5.41e-01 | 93.6% | 88.8% |
| 4983888 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 68.0 | 5.53e-01 | 98.8% | 56.3% |
| 5062088 | 2002.1.1.449 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF3641 | 0.73 | 69.0 | 5.55e-01 | 100.0% | 62.6% |
| 5034887 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 68.0 | 5.51e-01 | 98.8% | 96.7% |
| 5050557 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.72 | 63.0 | 5.42e-01 | 94.2% | 96.2% |
| 4975092 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.72 | 67.0 | 5.25e-01 | 100.0% | 55.1% |
| 4934129 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 67.0 | 5.25e-01 | 100.0% | 51.9% |
| 4946871 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.71 | 67.0 | 5.13e-01 | 100.0% | 50.0% |
| 4948142 | 2002.1.1.224 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM | 0.71 | 67.0 | 5.16e-01 | 100.0% | 51.4% |
| 4631270 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 63.0 | 5.37e-01 | 95.3% | 93.1% |
| 5051867 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 62.0 | 5.34e-01 | 94.2% | 94.1% |
| 5025778 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 62.0 | 5.04e-01 | 94.2% | 82.9% |
| 4996947 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 62.0 | 4.91e-01 | 94.8% | 77.4% |
| 4932017 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 66.0 | 4.99e-01 | 100.0% | 48.9% |
| 4970981 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 65.0 | 5.83e-01 | 98.8% | 82.2% |
| 5044211 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 64.0 | 4.73e-01 | 97.7% | 52.6% |
| 4929847 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 65.0 | 5.12e-01 | 98.3% | 52.7% |
| 5020840 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 65.0 | 5.19e-01 | 100.0% | 53.3% |
| 4954760 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 61.0 | 5.06e-01 | 94.2% | 86.2% |
| 5043362 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 62.0 | 5.23e-01 | 95.9% | 92.9% |
| 5074581 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 60.0 | 5.12e-01 | 93.6% | 98.9% |
| 5056543 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 58.0 | 5.13e-01 | 89.5% | 92.8% |
| 4934106 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 65.0 | 5.13e-01 | 100.0% | 59.4% |
| 4151287 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 61.0 | 5.07e-01 | 95.9% | 86.3% |
| 5031653 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 61.0 | 5.08e-01 | 94.8% | 92.8% |
| 5060550 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 63.0 | 5.33e-01 | 98.8% | 99.6% |
| 5034286 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 61.0 | 5.21e-01 | 95.9% | 95.6% |
| 4930153 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 60.0 | 5.09e-01 | 94.2% | 91.8% |
| 4128825 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 64.0 | 5.15e-01 | 100.0% | 56.2% |
| 4957127 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 60.0 | 5.21e-01 | 94.8% | 95.8% |
| 4195504 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.68 | 60.0 | 5.13e-01 | 95.9% | 92.7% |
| 4834102 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 62.0 | 5.83e-01 | 97.1% | 85.6% |
| 5031360 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 59.0 | 4.96e-01 | 94.2% | 88.3% |
| 3948131 | 2002.1.1.122 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS | 0.67 | 61.0 | 4.74e-01 | 98.8% | 52.8% |
| 4997146 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 58.0 | 5.01e-01 | 93.0% | 94.1% |
| 5002713 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 61.0 | 4.80e-01 | 98.8% | 51.6% |
| 4942889 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 58.0 | 5.10e-01 | 94.2% | 97.6% |
| 4977885 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.66 | 61.0 | 4.90e-01 | 100.0% | 63.7% |
| 4972626 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 60.0 | 5.09e-01 | 99.4% | 74.2% |
| 4994600 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.65 | 60.0 | 5.72e-01 | 100.0% | 94.0% |
| 5051584 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 58.0 | 5.17e-01 | 98.8% | 75.4% |
| 4943846 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 58.0 | 4.87e-01 | 98.8% | 83.2% |
| 5051449 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 58.0 | 5.02e-01 | 99.4% | 71.9% |
| 4958428 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.63 | 59.0 | 5.13e-01 | 99.4% | 87.6% |
| 5079264 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 57.0 | 4.76e-01 | 99.4% | 79.3% |
| 5036843 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 57.0 | 5.01e-01 | 98.3% | 93.1% |
| 3602542 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 57.0 | 4.82e-01 | 100.0% | 81.0% |
| 5073292 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 57.0 | 4.67e-01 | 100.0% | 79.4% |
| 4629816 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.61 | 53.0 | 4.47e-01 | 98.8% | 55.9% |
| 2889549 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.60 | 40.0 | 4.72e-01 | 94.2% | 96.7% |
| 3305814 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.59 | 52.0 | 4.55e-01 | 93.0% | 80.8% |
| 4953258 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 53.0 | 4.42e-01 | 99.4% | 60.7% |
| 168781 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.58 | 53.0 | 4.43e-01 | 100.0% | 74.5% |
| None | — | 0.57 | 52.0 | 4.41e-01 | 100.0% | 65.7% | |
| 4557448 | 2002.1.1.10 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS | 0.57 | 47.0 | 4.15e-01 | 99.4% | 59.2% |
| 5055220 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.56 | 48.0 | 4.31e-01 | 98.3% | 65.3% |
| 4963595 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.54 | 47.0 | 4.88e-01 | 96.5% | 100.0% |
| 4504542 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.54 | 50.0 | 4.49e-01 | 100.0% | 82.6% |
| 3938885 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.54 | 50.0 | 3.68e-01 | 100.0% | 52.4% |
| 5076312 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.54 | 45.0 | 4.37e-01 | 98.8% | 79.5% |
| 4491519 | 2002.1.1.191 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MupG_N | 0.52 | 47.0 | 4.26e-01 | 98.8% | 73.0% |
| 3543316 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.52 | 46.0 | 3.44e-01 | 96.5% | 80.5% |
| 4466712 | 2007.1.18.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) › MTD | 0.51 | 47.0 | 3.99e-01 | 99.4% | 86.9% |
| 4948442 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.50 | 39.0 | 3.79e-01 | 98.8% | 72.6% |
| 4935656 | 2003.1.1.123 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF166 | 0.50 | 41.0 | 4.32e-01 | 99.4% | 96.1% |
| 4515252 | 2007.1.18.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) › MTD | 0.50 | 46.0 | 3.96e-01 | 99.4% | 89.3% |
D2
medium
residues 192-208_228-294
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.52 | 31.0 | 3.44e-01 | 83.3% | 74.6% |