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ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00043
Bact-VirALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00043
Identity
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 70-155
Domain cluster:
rep: PH2015_20_scaffold_1_prodigal-single.1__X__X__00020__D217-300
D2
medium
residues 5-62
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f9iD00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.64 | 49.0 | 3.20e-01 | 82.8% | 54.5% |
| 3purA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 46.0 | 4.25e-01 | 75.9% | 71.6% |
| 2v5oA03 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.52 | 40.0 | 3.26e-01 | 93.1% | 84.8% |
| 3ng0A02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.50 | 38.0 | 2.44e-01 | 87.9% | 91.1% |
| 2k5cA00 | 3.10.20.830 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bifunctional heparan sulphate n-deacetylase/n-sulphotransferase | 0.50 | 39.0 | 3.47e-01 | 89.7% | 58.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4930539 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.76 | 52.0 | 4.73e-01 | 70.7% | 76.0% |
| 3922469 | 604.1.1.200 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Ima1_N | 0.67 | 45.0 | 4.61e-01 | 84.5% | 72.7% |
| 3486337 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 45.0 | 4.66e-01 | 89.7% | 74.5% |
| 4222282 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 46.0 | 4.46e-01 | 70.7% | 67.7% |
| 3591159 | 376.1.3.11 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 | 0.66 | 44.0 | 3.27e-01 | 70.7% | 61.3% |
| 3274032 | 375.1.1.211 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ima1_N | 0.65 | 42.0 | 4.61e-01 | 81.0% | 84.4% |
| 4469728 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.65 | 50.0 | 3.27e-01 | 84.5% | 81.5% |
| 4313184 | 375.1.1.14 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L32p | 0.64 | 36.0 | 3.61e-01 | 70.7% | 53.3% |
| 5041389 | 4224.1.1.1 ↗ | few secondary structure elements › CHY zinc finger › CHY zinc finger › CHY zinc finger › zf-CHY | 0.63 | 43.0 | 3.70e-01 | 72.4% | 44.2% |
| 1682921 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.62 | 47.0 | 4.31e-01 | 82.8% | 71.8% |
| 4577135 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.59 | 42.0 | 3.84e-01 | 77.6% | 73.8% |
| 4011425 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 2.96e-01 | 81.0% | 20.9% |
| 3539528 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 40.0 | 3.37e-01 | 77.6% | 57.6% |
| 3630024 | 2003.1.4.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 | 0.55 | 47.0 | 2.95e-01 | 96.6% | 31.9% |
| 3607772 | 376.1.4.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog | 0.55 | 44.0 | 3.97e-01 | 87.9% | 90.0% |
| 4933445 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 39.0 | 2.55e-01 | 89.7% | 53.8% |