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ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00082

Bact-Vir

ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00082

Identity

Kingdom:
phage

Quality

93.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-193
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03314.21 best DUF273 42.7 7.00e-11 62.2% 45.2%
PF05637.19 Glyco_transf_34 29.5 8.80e-07 50.5% 32.8%
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p6wA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.84 80.0 7.78e-01 100.0% 91.3%
7zllA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.76 72.0 6.26e-01 100.0% 86.1%
1g9rA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.76 72.0 6.20e-01 99.5% 86.3%
6u4bA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.76 72.0 6.08e-01 100.0% 87.7%
4aylA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.75 71.0 6.83e-01 100.0% 96.2%
1ll0B00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.74 70.0 6.10e-01 100.0% 78.3%
3tztA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.71 66.0 6.16e-01 100.0% 85.8%
1foaA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.69 65.0 6.21e-01 100.0% 97.7%
4b4uA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.67 31.0 4.54e-01 87.2% 95.3%
2bo4A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.67 62.0 6.19e-01 97.9% 100.0%
2c0nA00 3.90.550.40 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.66 58.0 5.80e-01 96.3% 91.6%
3zf8A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.64 60.0 5.13e-01 100.0% 90.6%
2ggoA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.62 58.0 5.62e-01 100.0% 99.0%
1npyA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.61 32.0 4.22e-01 92.0% 94.0%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 42.0 4.06e-01 100.0% 61.8%
6ecpB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.59 34.0 3.89e-01 99.5% 73.8%
3d8uB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 34.0 4.18e-01 98.9% 90.8%
1edzA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.57 33.0 3.94e-01 86.2% 81.7%
8a57D01 3.40.50.11060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTPase HflX, N-terminal domain 0.57 32.0 4.17e-01 99.5% 100.0%
2c2xA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.56 35.0 3.91e-01 98.9% 76.6%
3l6uA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 36.0 4.39e-01 94.1% 99.2%
3n75A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 34.0 3.97e-01 98.9% 87.6%
2h0aA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 33.0 4.21e-01 94.7% 100.0%
1efaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 36.0 4.30e-01 93.1% 98.4%
5hsgA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 35.0 4.19e-01 99.5% 98.4%
2hqbA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 36.0 4.31e-01 99.5% 100.0%
3ksmA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 35.0 4.23e-01 99.5% 100.0%
4rk6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 35.0 4.19e-01 94.7% 99.2%
4kqcA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 37.0 4.00e-01 100.0% 84.3%
4irxA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 35.0 4.07e-01 100.0% 93.3%
2vk2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 35.0 4.15e-01 100.0% 98.5%
4ywhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 38.0 4.33e-01 93.6% 97.9%
1ixcA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 28.0 3.74e-01 100.0% 98.0%
3rotA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 36.0 4.19e-01 94.1% 98.5%
3uugA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 39.0 4.34e-01 93.6% 98.0%
4rxtA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 36.0 4.12e-01 100.0% 96.4%
3l49A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 35.0 4.07e-01 100.0% 98.4%
3cs3A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 33.0 3.97e-01 99.5% 94.5%
3tb6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 36.0 4.17e-01 99.5% 97.8%
4rxuA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 38.0 4.29e-01 93.6% 98.0%
1ba2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 34.0 4.02e-01 99.5% 98.4%
2fepA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 35.0 4.12e-01 94.1% 98.5%
4ry8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 36.0 4.02e-01 98.9% 91.2%
4ry9A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 35.0 4.07e-01 100.0% 97.8%
1i6aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 28.0 3.49e-01 94.7% 90.7%
4hrvA00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.50 35.0 3.98e-01 98.4% 95.7%
1d7aA00 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 33.0 3.55e-01 99.5% 75.8%
3iprA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.50 34.0 3.92e-01 94.7% 94.9%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3739116 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.88 86.0 7.40e-01 100.0% 83.7%
3640340 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.88 86.0 7.50e-01 100.0% 86.0%
3736736 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.88 85.0 6.73e-01 100.0% 69.7%
3182572 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.88 85.0 6.95e-01 100.0% 81.3%
3617038 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.88 84.0 6.64e-01 100.0% 67.7%
3740465 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.88 85.0 7.25e-01 100.0% 86.9%
3171238 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.87 84.0 7.26e-01 100.0% 86.8%
3419255 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.87 85.0 7.21e-01 100.0% 80.7%
3206228 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.87 84.0 7.03e-01 100.0% 72.2%
3795307 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.87 84.0 6.61e-01 100.0% 61.6%
3925396 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.87 83.0 6.58e-01 100.0% 74.8%
3742067 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.87 84.0 7.33e-01 100.0% 86.2%
3937899 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.86 83.0 6.48e-01 100.0% 71.5%
3645144 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.86 83.0 6.44e-01 100.0% 76.3%
3245980 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.86 82.0 6.41e-01 100.0% 63.8%
3925763 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.86 82.0 7.08e-01 100.0% 73.8%
3931986 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.86 82.0 6.38e-01 100.0% 66.5%
3661488 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.86 83.0 6.46e-01 100.0% 63.9%
3720673 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.85 82.0 7.16e-01 100.0% 79.6%
3930685 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.85 82.0 6.88e-01 100.0% 76.2%
3235666 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.85 82.0 6.88e-01 100.0% 65.2%
3237529 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.85 82.0 6.46e-01 100.0% 65.2%
3799645 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.85 76.0 6.92e-01 92.0% 74.0%
4597020 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.85 82.0 6.43e-01 100.0% 64.9%
3247692 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.85 81.0 6.54e-01 100.0% 69.7%
3520205 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.85 81.0 6.48e-01 100.0% 66.8%
3928479 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.84 69.0 6.76e-01 84.6% 79.3%
2393729 7516.1.1.20 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 0.84 80.0 7.75e-01 100.0% 90.8%
3346202 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.82 78.0 6.42e-01 100.0% 83.9%
4995791 7516.1.1.52 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotid_trans 0.81 74.0 7.37e-01 100.0% 92.3%
4009815 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.79 75.0 6.03e-01 100.0% 71.2%
4471304 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.78 74.0 6.38e-01 100.0% 81.5%
3177084 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.77 73.0 6.23e-01 100.0% 84.5%
3589806 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.77 73.0 6.31e-01 100.0% 86.4%
3838655 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.77 73.0 6.02e-01 100.0% 89.2%
3367173 7516.1.1.52 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotid_trans 0.77 72.0 6.35e-01 100.0% 83.8%
3253024 7516.1.1.28 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_24 0.76 72.0 5.82e-01 100.0% 70.4%
3897091 7516.1.1.17 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_6 0.76 72.0 6.12e-01 100.0% 78.5%
4491518 7516.1.1.153 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2, Glyco_transf_8 0.76 72.0 4.99e-01 100.0% 38.6%
4803835 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.76 71.0 6.22e-01 98.9% 95.9%
3449210 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.76 71.0 5.58e-01 100.0% 67.6%
3821658 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.75 71.0 5.66e-01 100.0% 71.0%
None 0.75 71.0 5.27e-01 100.0% 65.2%
None 0.75 71.0 5.50e-01 100.0% 71.3%
3478972 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.75 63.0 5.33e-01 100.0% 54.8%
4321757 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.75 71.0 6.15e-01 100.0% 78.2%
None 0.75 71.0 5.50e-01 100.0% 71.2%
2531092 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.75 71.0 6.10e-01 100.0% 75.0%
3926320 7516.1.1.33 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF273 0.75 54.0 5.64e-01 73.9% 100.0%
3586951 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.74 70.0 5.95e-01 100.0% 83.8%
3831741 7516.1.1.61 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Mannosyl_trans3 0.73 69.0 5.98e-01 100.0% 80.0%
3818593 7516.1.1.6 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.73 69.0 5.10e-01 100.0% 64.5%
3931101 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.73 68.0 6.53e-01 100.0% 96.7%
3643216 7516.1.1.8 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Galactosyl_T 0.72 67.0 6.20e-01 100.0% 88.2%
4124691 7516.1.1.92 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › RgpF 0.72 67.0 5.72e-01 100.0% 81.7%
3270922 7516.1.1.14 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I 0.71 65.0 5.07e-01 98.4% 65.2%
4238572 7516.1.1.60 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_25 0.71 62.0 5.45e-01 94.1% 77.1%
None 0.70 66.0 5.42e-01 100.0% 77.8%
5050760 7516.1.1.24 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.70 63.0 6.00e-01 95.7% 99.1%
4315202 7516.1.1.1 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase 0.67 62.0 5.26e-01 100.0% 84.3%
4984199 7516.1.1.24 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.67 61.0 5.63e-01 97.9% 97.5%
4164230 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.66 31.0 4.06e-01 91.5% 78.1%
4409071 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.65 32.0 4.07e-01 92.0% 76.5%
5073117 7516.1.1.1 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase 0.65 61.0 5.56e-01 100.0% 91.0%
5073694 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.64 60.0 5.37e-01 100.0% 77.2%
5065479 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.63 59.0 5.34e-01 100.0% 77.2%
3980081 2007.2.2.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.61 29.0 3.93e-01 98.9% 88.2%
146898 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.60 42.0 3.92e-01 100.0% 55.8%
3947396 2007.2.2.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.59 29.0 3.93e-01 99.5% 91.5%
3708170 2007.1.16.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn 0.55 32.0 3.60e-01 100.0% 71.3%
3691936 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.53 34.0 3.70e-01 92.0% 76.8%
3945153 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.52 36.0 4.06e-01 100.0% 91.4%
4557325 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.52 36.0 4.06e-01 99.5% 90.3%
4157122 2007.2.2.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.52 30.0 3.71e-01 100.0% 93.5%
4328387 2005.1.1.11 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.51 42.0 3.91e-01 100.0% 69.8%
D2 medium residues 220-284
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4opfA00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.65 47.0 2.95e-01 78.5% 16.1%
7dsmA01 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.65 44.0 2.92e-01 72.3% 17.7%
3mweB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 44.0 3.47e-01 76.9% 46.4%
5d84A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 41.0 2.99e-01 70.8% 37.2%
1k92A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 44.0 3.32e-01 78.5% 32.5%
7zghA01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.60 43.0 2.73e-01 80.0% 15.6%
4nzpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 42.0 3.33e-01 78.5% 35.5%
1yt8A03 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.59 39.0 3.59e-01 76.9% 49.5%
3cs3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 41.0 3.30e-01 75.4% 37.7%
6mhlB01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.58 42.0 2.63e-01 80.0% 14.4%
1u3dA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 41.0 3.13e-01 76.9% 54.7%
1dnpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 39.0 3.25e-01 76.9% 37.7%
4q6bA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 40.0 3.19e-01 80.0% 36.6%
4rweA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 38.0 2.91e-01 78.5% 28.9%
7essA01 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.56 40.0 3.26e-01 78.5% 59.8%
1efaA03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 39.0 3.19e-01 78.5% 38.5%
3i45A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 39.0 2.94e-01 76.9% 30.0%
4ru1A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 37.0 2.94e-01 76.9% 31.1%
2vptA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.55 39.0 2.85e-01 76.9% 32.8%
3hutA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 39.0 3.08e-01 78.5% 34.7%
2fn8A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 36.0 2.83e-01 78.5% 28.7%
3mtiB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 39.0 2.96e-01 80.0% 34.4%
2gdqA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.54 36.0 2.45e-01 75.4% 17.3%
4xfjB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 43.0 3.23e-01 90.8% 40.5%
1qz9A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 38.0 2.67e-01 80.0% 19.9%
4j1qA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 43.0 2.75e-01 98.5% 71.9%
3dnfA03 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.53 43.0 3.88e-01 95.4% 99.0%
4rxtA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 45.0 3.48e-01 100.0% 81.0%
4iilA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 43.0 3.26e-01 93.8% 96.0%
3lucA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 37.0 3.06e-01 76.9% 38.3%
1aq0A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 41.0 2.77e-01 92.3% 32.0%
3ik4A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 41.0 2.84e-01 89.2% 81.7%
5bq3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 38.0 2.98e-01 80.0% 38.1%
2wnhA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.51 43.0 2.72e-01 100.0% 67.9%
6gt9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 42.0 3.28e-01 100.0% 70.1%
6gfaA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 36.0 2.87e-01 75.4% 70.3%
2y27B01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.51 44.0 2.86e-01 98.5% 47.7%
2wyoA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.51 42.0 3.46e-01 100.0% 88.5%
2khoA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 36.0 2.88e-01 80.0% 35.8%
3qk7C02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 41.0 3.37e-01 98.5% 85.3%
4ry8C02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 41.0 3.25e-01 100.0% 72.3%
2rgyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 42.0 3.45e-01 100.0% 91.1%
2h3hB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 41.0 3.28e-01 100.0% 75.2%
3tb6B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 41.0 3.33e-01 98.5% 83.6%
3k9cA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 42.0 3.38e-01 98.5% 83.0%
3kkeA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 41.0 3.31e-01 98.5% 83.2%
3mebA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.50 34.0 2.37e-01 73.8% 17.4%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5029696 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.68 48.0 3.40e-01 75.4% 48.0%
3974528 2007.1.2.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LppC 0.64 44.0 3.46e-01 76.9% 33.1%
3232231 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 45.0 3.26e-01 76.9% 40.0%
5048211 7584.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins 0.62 42.0 2.59e-01 70.8% 18.5%
4978361 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.61 43.0 2.81e-01 76.9% 17.0%
4988863 2007.1.2.13 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 0.61 41.0 2.97e-01 78.5% 24.2%
2484554 2003.4.1.0 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes 0.60 42.0 4.42e-01 80.0% 87.5%
2754458 2003.4.1.1 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.59 41.0 4.24e-01 80.0% 79.0%
3626458 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.59 44.0 3.01e-01 84.6% 20.4%
4027017 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 49.0 3.41e-01 98.5% 27.5%
2641673 2484.3.1.1 mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N 0.58 42.0 3.19e-01 76.9% 60.8%
3925575 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.58 41.0 2.62e-01 75.4% 26.9%
3958702 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.58 41.0 2.60e-01 78.5% 14.0%
5007458 2007.1.2.13 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 0.57 40.0 2.95e-01 75.4% 26.7%
4048046 2007.1.2.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LppC 0.57 42.0 3.01e-01 78.5% 42.1%
3957552 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 39.0 2.64e-01 75.4% 19.2%
4931483 4143.1.1.6 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc 0.57 41.0 3.23e-01 76.9% 50.3%
3960428 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.56 39.0 2.93e-01 75.4% 43.2%
5042969 4143.1.1.1 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.56 40.0 3.77e-01 80.0% 64.7%
3299538 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.56 46.0 3.42e-01 100.0% 54.0%
3947020 2007.1.2.10 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.55 40.0 3.23e-01 78.5% 38.5%
3287922 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.55 39.0 3.03e-01 80.0% 32.7%
4961825 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.55 38.0 3.02e-01 75.4% 61.3%
5063668 2484.1.1.21 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.55 39.0 3.05e-01 80.0% 31.5%
1481999 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.54 39.0 3.21e-01 78.5% 42.7%
3269295 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.54 39.0 2.84e-01 80.0% 25.7%
4471333 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.54 41.0 3.04e-01 84.6% 31.9%
4066632 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.53 39.0 2.89e-01 80.0% 48.4%
3307718 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.53 38.0 3.29e-01 80.0% 83.3%
3667573 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 45.0 3.23e-01 100.0% 68.4%
3254481 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 36.0 2.64e-01 70.8% 29.8%
4592067 2007.1.2.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LppC 0.53 39.0 2.51e-01 81.5% 18.6%
1203467 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 39.0 2.97e-01 83.1% 31.2%
4679973 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 37.0 2.89e-01 80.0% 33.7%
5061715 7567.1.1.1 a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L 0.52 38.0 2.77e-01 80.0% 26.2%
3501929 2003.1.1.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.52 42.0 3.06e-01 95.4% 46.8%
3677284 109.4.1.1285 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.51 41.0 2.38e-01 95.4% 10.6%
4928835 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.51 38.0 2.70e-01 83.1% 23.2%
5082008 2006.1.6.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.51 42.0 3.15e-01 100.0% 61.5%
4992236 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 35.0 2.43e-01 78.5% 17.8%
5037812 7534.1.1.1 a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf 0.51 34.0 2.45e-01 70.8% 25.5%
4886455 511.1.1.1 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.51 41.0 3.05e-01 92.3% 53.0%
3943963 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.51 43.0 3.39e-01 100.0% 80.7%
D3 medium residues 285-356
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ae1A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.86 79.0 5.34e-01 100.0% 42.9%
2ag5C00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.86 79.0 5.32e-01 100.0% 38.9%
1k2wA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.85 79.0 5.24e-01 100.0% 39.8%
3guyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 78.0 5.49e-01 100.0% 47.5%
3ssmC02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.84 75.0 5.25e-01 100.0% 33.2%
4e4yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.81 74.0 5.02e-01 100.0% 37.2%
3rd5A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.81 74.0 4.90e-01 100.0% 34.0%
4trrG00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.80 72.0 5.01e-01 100.0% 42.9%
1bxkA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.78 69.0 4.73e-01 100.0% 39.7%
3sxpA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.76 69.0 4.89e-01 100.0% 41.8%
2esrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 67.0 5.14e-01 100.0% 48.1%
6bwlA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.74 66.0 4.73e-01 100.0% 69.1%
6g80B01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 66.0 4.65e-01 100.0% 44.8%
3qvoA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.73 63.0 4.57e-01 100.0% 35.2%
3dhnA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 61.0 4.38e-01 100.0% 32.4%
3g2mA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 62.0 4.75e-01 100.0% 47.9%
3abiA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 59.0 4.53e-01 100.0% 69.8%
1ekeA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.64 55.0 4.24e-01 100.0% 78.4%
4m8kA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.63 56.0 4.02e-01 100.0% 79.8%
5fbhA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 53.0 4.08e-01 100.0% 56.1%
2o3jB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 52.0 3.86e-01 100.0% 70.0%
1tezA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 52.0 4.41e-01 100.0% 94.5%
3outA02 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 52.0 4.65e-01 100.0% 83.3%
2obnD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 51.0 4.33e-01 100.0% 90.9%
3jvdA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 51.0 4.26e-01 100.0% 72.8%
2vk2A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 51.0 4.03e-01 100.0% 67.3%
5umbA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 49.0 3.79e-01 100.0% 90.1%
5bq3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 48.0 3.91e-01 100.0% 69.7%
1eluA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 48.0 3.42e-01 100.0% 41.3%
4v19S00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.57 50.0 4.05e-01 100.0% 65.7%
1a9xA08 3.40.50.1380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain 0.57 48.0 4.34e-01 100.0% 67.0%
4hh3C02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.57 49.0 4.09e-01 100.0% 78.8%
1m0wA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.56 48.0 4.06e-01 100.0% 73.6%
3g1wA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 46.0 3.86e-01 100.0% 71.9%
5jicA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 47.0 3.63e-01 100.0% 85.7%
4yleA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 46.0 3.82e-01 100.0% 71.2%
4q6bA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 47.0 3.93e-01 100.0% 71.6%
4w8hA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.55 47.0 4.02e-01 100.0% 78.7%
4rweA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 45.0 3.69e-01 100.0% 66.7%
4fw9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 48.0 3.25e-01 100.0% 79.1%
4piwA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 47.0 3.38e-01 100.0% 41.9%
2khoA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 46.0 3.66e-01 100.0% 73.6%
2qxlB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 46.0 3.83e-01 100.0% 64.9%
1ka1A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.53 40.0 3.00e-01 86.1% 48.9%
1mzjB01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 38.0 3.05e-01 80.6% 58.7%
6frlA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 39.0 2.46e-01 83.3% 82.1%
7tlrA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 45.0 3.15e-01 100.0% 32.3%
1zjjA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 43.0 3.85e-01 100.0% 84.6%
6acsA00 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.51 43.0 3.17e-01 98.6% 67.6%
7paxA01 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.51 41.0 2.95e-01 94.4% 87.5%
6imeA01 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.51 44.0 3.06e-01 100.0% 61.7%
4gniB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 43.0 3.47e-01 100.0% 70.6%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3600315 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.88 82.0 5.19e-01 100.0% 38.7%
3282577 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.88 81.0 5.51e-01 100.0% 42.1%
3785671 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.85 78.0 5.05e-01 100.0% 32.7%
3688109 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.85 79.0 5.22e-01 100.0% 40.0%
3950501 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.84 76.0 5.30e-01 100.0% 44.2%
4432138 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.84 77.0 5.04e-01 100.0% 37.1%
4591841 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.84 77.0 4.98e-01 100.0% 34.8%
3961600 2003.1.1.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.84 78.0 5.13e-01 100.0% 31.2%
4961449 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.83 77.0 5.69e-01 100.0% 56.5%
4941769 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.83 75.0 4.96e-01 100.0% 37.0%
4997839 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.82 76.0 4.97e-01 100.0% 31.1%
4967531 2003.1.5.41 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RMNT_CmcI 0.80 71.0 4.85e-01 100.0% 29.1%
5048781 2003.1.1.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.79 72.0 4.48e-01 100.0% 27.5%
4985740 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.79 72.0 5.44e-01 100.0% 50.9%
4967063 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.78 71.0 4.87e-01 100.0% 37.0%
5083287 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.77 70.0 5.03e-01 100.0% 44.6%
4100871 2003.1.5.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ 0.76 69.0 4.97e-01 100.0% 41.5%
3839726 2003.1.1.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.76 69.0 4.41e-01 100.0% 28.9%
4877432 2003.1.5.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase 0.74 65.0 5.02e-01 100.0% 53.7%
3675137 2003.1.5.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase 0.73 64.0 4.79e-01 100.0% 50.3%
4836890 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.72 60.0 4.93e-01 98.6% 50.4%
3260127 2003.1.1.143 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA, NAD_binding_10 0.71 63.0 4.17e-01 100.0% 33.3%
168640 2003.1.1.143 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA, NAD_binding_10 0.71 61.0 4.40e-01 100.0% 33.2%
3277761 2003.1.1.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 0.70 63.0 4.54e-01 100.0% 37.5%
4015260 2003.1.1.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA 0.70 62.0 4.07e-01 100.0% 35.0%
4971992 2003.1.1.386 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_C 0.69 61.0 3.83e-01 100.0% 24.2%
4364067 2003.1.1.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N 0.69 55.0 4.34e-01 87.5% 61.3%
3449866 298.1.1.34 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Sacchrp_dh_NADP 0.69 61.0 3.84e-01 100.0% 24.8%
5065870 2003.1.1.39 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP 0.69 61.0 3.88e-01 100.0% 85.3%
4460822 2003.1.1.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N 0.69 60.0 4.46e-01 100.0% 47.2%
4968431 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.68 60.0 4.10e-01 100.0% 41.2%
4680576 2003.1.1.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N 0.67 59.0 4.25e-01 100.0% 51.4%
3312833 2003.1.8.10 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › NmrA 0.67 59.0 5.07e-01 100.0% 75.7%
3939493 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.66 50.0 3.52e-01 100.0% 24.7%
3814752 7534.1.1.1 a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf 0.66 49.0 3.38e-01 79.2% 50.0%
4334874 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.62 52.0 3.44e-01 98.6% 71.1%
3518022 4143.1.1.1 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.61 51.0 4.50e-01 91.7% 66.7%
3594456 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 49.0 3.35e-01 91.7% 90.7%
3307718 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.60 42.0 3.63e-01 73.6% 87.5%
5023669 2003.1.1.75 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF1611_N 0.60 51.0 4.19e-01 100.0% 66.2%
3665790 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.60 51.0 4.65e-01 100.0% 75.0%
5044260 7542.1.2.3 a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › AcnX_2nd 0.57 43.0 3.99e-01 100.0% 63.2%
3227060 109.4.1.372 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ECSIT_N 0.57 46.0 3.84e-01 90.3% 85.4%
4863451 2484.1.1.53 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MreB_Mbl 0.56 48.0 3.85e-01 100.0% 74.2%
5077816 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.55 46.0 3.71e-01 100.0% 71.9%
3838224 2484.3.1.1 mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N 0.55 45.0 4.05e-01 100.0% 70.4%
3958702 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.55 46.0 3.06e-01 100.0% 28.9%
4943387 7542.1.2.4 a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › PF28406 0.54 41.0 3.79e-01 100.0% 63.2%
5011076 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.54 45.0 4.00e-01 100.0% 80.9%
3587583 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.53 44.0 3.89e-01 100.0% 67.5%
4177261 7534.1.1.1 a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf 0.52 44.0 3.15e-01 100.0% 59.6%
4958427 7525.1.1.1 a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 0.52 44.0 3.32e-01 100.0% 37.4%
3969363 2002.1.1.97 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI 0.51 44.0 3.32e-01 100.0% 37.9%
3959215 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 42.0 3.01e-01 100.0% 38.1%
D4 medium residues 357-442
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bj3D02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.69 38.0 3.93e-01 95.3% 56.8%
3nrbB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 37.0 3.83e-01 93.0% 55.4%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.67 38.0 3.93e-01 95.3% 58.5%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 38.0 3.82e-01 95.3% 54.5%
1f0xA04 3.30.1370.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › D-lactate dehydrogenase, cap domain, subdomain 2 0.66 38.0 3.89e-01 95.3% 56.5%
2cqiA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.66 37.0 3.48e-01 95.3% 45.6%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.66 35.0 3.83e-01 95.3% 63.2%
2nzcB00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.65 37.0 3.86e-01 95.3% 59.3%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.65 36.0 3.80e-01 98.8% 60.0%
4nohA01 3.30.70.3060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 34.0 3.70e-01 95.3% 60.6%
3n0vA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 36.0 3.71e-01 95.3% 57.1%
3w7bA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 37.0 3.70e-01 95.3% 55.7%
4ofyD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 35.0 3.29e-01 97.7% 43.9%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 36.0 3.77e-01 95.3% 60.8%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 35.0 3.75e-01 94.2% 61.8%
2dgxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 36.0 3.79e-01 95.3% 62.5%
2rhqB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.61 39.0 3.96e-01 98.8% 66.3%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 36.0 3.52e-01 96.5% 53.2%
1y0hB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 38.0 3.70e-01 95.3% 56.1%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.59 42.0 4.25e-01 96.5% 72.7%
6hhnA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 37.0 3.63e-01 97.7% 58.7%
2vfrA03 3.30.70.2530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 33.0 3.35e-01 96.5% 54.0%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.57 33.0 3.36e-01 96.5% 55.2%
5xuhA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.56 48.0 4.27e-01 95.3% 95.2%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 34.0 3.44e-01 97.7% 60.0%
2wasA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.55 47.0 4.34e-01 95.3% 96.5%
2joqA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 31.0 3.33e-01 95.3% 62.7%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 38.0 3.32e-01 94.2% 48.8%
3b5iB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 35.0 2.61e-01 95.3% 23.3%
6ctzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 33.0 3.26e-01 95.3% 55.9%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 33.0 3.31e-01 94.2% 62.1%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 31.0 3.15e-01 95.3% 58.3%
5koxA02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 29.0 2.93e-01 95.3% 51.2%
3njcA00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.51 35.0 2.94e-01 95.3% 40.5%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4991207 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.71 40.0 4.03e-01 95.3% 53.3%
4523483 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.71 38.0 4.06e-01 95.3% 60.0%
5047432 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.70 38.0 3.82e-01 95.3% 51.1%
4120122 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.70 40.0 3.96e-01 95.3% 53.3%
4154211 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.70 40.0 3.96e-01 95.3% 53.3%
4980617 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.70 38.0 3.95e-01 95.3% 57.0%
4937090 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.70 38.0 3.97e-01 95.3% 57.7%
5063265 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.70 38.0 4.04e-01 95.3% 60.0%
4929421 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.69 37.0 3.82e-01 95.3% 53.6%
4998406 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.69 39.0 4.02e-01 95.3% 58.7%
4947398 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 37.0 4.00e-01 95.3% 60.0%
5061295 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.68 37.0 3.92e-01 95.3% 60.0%
4978378 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.67 37.0 3.77e-01 95.3% 54.1%
5041003 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.67 37.0 3.85e-01 95.3% 57.7%
4975141 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.67 37.0 3.96e-01 95.3% 61.3%
3590556 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.67 38.0 4.16e-01 95.3% 68.6%
3301203 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 37.0 3.82e-01 95.3% 60.0%
3434168 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.64 37.0 3.44e-01 96.5% 45.7%
4412768 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.64 39.0 3.48e-01 94.2% 42.4%
3716008 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.64 39.0 3.76e-01 96.5% 54.7%
3650582 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 36.0 3.97e-01 95.3% 71.0%
4942237 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.62 36.0 3.67e-01 98.8% 57.6%
4968326 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.61 37.0 3.74e-01 97.7% 60.0%
3324140 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.61 38.0 3.64e-01 96.5% 53.0%
5054197 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.61 33.0 3.47e-01 97.7% 56.2%
5051728 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.61 34.0 2.58e-01 95.3% 22.5%
4189564 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.61 37.0 3.72e-01 97.7% 59.1%
3385766 304.28.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.60 34.0 3.43e-01 94.2% 52.2%
4467451 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.60 36.0 3.62e-01 97.7% 57.8%
4634052 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.59 36.0 3.60e-01 96.5% 58.0%
5028585 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.59 35.0 3.53e-01 97.7% 57.6%
4238351 11.1.1.96 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.58 33.0 2.96e-01 95.3% 38.4%
4948334 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.58 35.0 3.57e-01 97.7% 59.1%
5073608 304.16.1.0 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like 0.58 35.0 3.54e-01 97.7% 59.1%
330634 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.57 35.0 3.50e-01 97.7% 57.1%
3625482 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.56 37.0 3.51e-01 95.3% 56.2%
3214492 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.55 31.0 3.34e-01 95.3% 64.3%
3594490 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.55 40.0 2.94e-01 95.3% 27.3%