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ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00142
Bact-VirALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00142
Identity
- Kingdom:
- phage
Quality
90.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-72
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 47.0 | 4.88e-01 | 100.0% | 92.4% |
| 2xvsA00 | 2.40.50.550 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 51.0 | 3.91e-01 | 100.0% | 44.0% |
| 6xw5A01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.57 | 42.0 | 3.24e-01 | 81.4% | 91.3% |
| 2dgyA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 38.0 | 3.74e-01 | 100.0% | 75.9% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 44.0 | 3.84e-01 | 100.0% | 81.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3977489 | 377.1.1.117 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF27493 | 0.66 | 37.0 | 4.22e-01 | 98.6% | 76.0% |
| 4138994 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.59 | 48.0 | 4.84e-01 | 100.0% | 92.9% |
| 3962098 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.57 | 47.0 | 4.81e-01 | 91.4% | 100.0% |
| 4316390 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.56 | 44.0 | 4.52e-01 | 98.6% | 92.3% |
| 5051696 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.56 | 32.0 | 3.52e-01 | 100.0% | 69.1% |
| 4113274 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 43.0 | 4.27e-01 | 100.0% | 86.7% |
| 3703423 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 38.0 | 3.10e-01 | 95.7% | 40.7% |
| 5049527 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.51 | 36.0 | 3.89e-01 | 100.0% | 88.3% |
| 5023143 | 3053.1.1.1 ↗ | beta barrels › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › barrel domain in putative modulator of DNA gyrase, PmbA/TldD › PmbA_TldD_3rd | 0.51 | 42.0 | 3.03e-01 | 95.7% | 88.9% |
| 4960002 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 31.0 | 2.89e-01 | 100.0% | 44.4% |
| 3507674 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.51 | 42.0 | 2.64e-01 | 100.0% | 34.9% |
| 3195891 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.50 | 32.0 | 2.77e-01 | 100.0% | 41.7% |